Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0591 |
Symbol | |
ID | 4078629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 632483 |
End bp | 633289 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005888 |
Product | peptidase M48, Ste24p |
Protein accession | YP_612586 |
Protein GI | 99080432 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0662871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0131631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTAC AGTATTTTTC ACGCCTATCC CGGCCGCTTT TGATGACAGC GGGGCTATTG ACCCTCCTGT CCTGCGGCAC AACCTATGAA TTGCCCGATA CCGGCGGTGT GCATTCGGAC GCGGCCGCGC GGCTCTATGC CGAAGCGCGC CAGAGCCCGC CGCCAAAAAC CTTGTCGCCC ACAGCGGCAC AGGCGCGGTT CGCCCGCGTG GAGCCACGCA TCATGCGAGC AGGGCGAGAG ACCTGCCTCC AACTACAGAC CGGTGTGAAC TGCAATGTAG ACATCGCGAT TGATCGTGAG ATGAAGGAGC GCAACGCCTA TTTCACCTAT CAGGATGGTC AGCCGATCAT CCGCATTTCA CTCCCGCTCA TTCAGGATAC AGGCAGCGAT GACGAGGTCG CCTTTGTCTT GGCCCATGAA TATGGTCACC TGATTGGCCG GCATGTGGAG AAGCAGCAGC AACAAGTGCT GGCGGGCGCA CTCATCGGCG GTGCGCTCGC GGGCATCGTA GGCGACAGCA GTGATGCCAT CGGTCTGGGG ATGGGTGTTG GCGCCAGTGC CGGGGGGATT GTCTATTCAC AGTCTTATGA GCTGGAGAGC GACACTCTCG GCACCCGGAT CGCTTATGCC GCTGGATATG ATCCGGTCGA GGGGGCGCGG TTCTTTGCCC GCTCCGAGGC CGCGCGCGGC GCCAGTGGCG GCTATTCCAT CTGGGGCACT CACCCGCCTG ACCGGCGCCG TGTTGCCACC GTTCTGGCCA CCAAGGCCCA GATCGAAGGG CAGGTCGGAC TGAAGGCCGC CAATTAG
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Protein sequence | MMLQYFSRLS RPLLMTAGLL TLLSCGTTYE LPDTGGVHSD AAARLYAEAR QSPPPKTLSP TAAQARFARV EPRIMRAGRE TCLQLQTGVN CNVDIAIDRE MKERNAYFTY QDGQPIIRIS LPLIQDTGSD DEVAFVLAHE YGHLIGRHVE KQQQQVLAGA LIGGALAGIV GDSSDAIGLG MGVGASAGGI VYSQSYELES DTLGTRIAYA AGYDPVEGAR FFARSEAARG ASGGYSIWGT HPPDRRRVAT VLATKAQIEG QVGLKAAN
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