| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0555 |
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| Symbol | |
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| ID | 4077906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 592559 |
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| End bp | 593632 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005852 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_612550 |
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| Protein GI | 99080396 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.141061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.72438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC TGACCTCATC GAACCCCTAT TTTGCAGGCC TTTTTGCCGA CCAGGAAATC
ACGGCCTTGT TTGAAGGGGC GGCCACGGCA GACGCGTTCT TGGCGTATGA GATGGCCCTG
ACCCGTGCCG CCGCAGAGGT TGGGCAGATC GACATCGGTC TGGCGCAGCG TGCGCTGGCG
GCCATGGTAG ATTTCACCCC CGATGTTGCG GAGCTTCAGA GCGATCTCTC AGCCGACGGC
ATGGCGGTGC CCGGATATGT GCGTCAACTC AAGGCCCATG TCGGCGCCGA ATGTGTCGCC
GCCGTGCATC CGGGGGCTAC CAGTCAGGAC TTGATAGACA CTGCACAGGC CTTGGCTCTT
CGCGCCGCAA ACGAAATTTA TATCTCGCGC CTCACCACGC TGATCGACGC GCTGCGCGAT
CTGGAAGAAA CCCATGGCGA TAATCGCCTG ATGGGGCGCA CCCGGATGCA GGCGGCGCTG
CCGATCTCCG CCGGACATCG GATCTCAAGC TGGATCTCAC CGCTCGTGCG TCATACCTCC
CGGCTGGAGA TACTGCGCCC CGAGGTAGAA GCCCTGCAAT TTGGTGGCCC GGTTGGCGAC
GGGCAGCGCA GCCAGCCCCA TGCCGCCGCC ATGGCCGACC ACATGGGAAA GGCACTGGGG
CTCCGCGCGC CTGAACGCTG CTGGCACACG GAGCGCGACT CATTGGTCAC ATATGCCGGA
TGGCTTTCTG CGCTTACCGG CAGTCTGGGC AAATTCGGCC AAGACGTGTG TTTGATGGTG
CAACAGGGTG TGGATGCGCT CGCGCAGGCC GGAGGCGGCA GCAGTTCTGC CATGGCGCAC
AAGCAAAACC CGGTTACCGC AGAGATGCTG GTGACGCTCT CACGCTACAA CGCCGGACAG
GTTGCCCTGA TGCATCAGGC CTCCGTGCAT GAACAGGAGC GCTCGGGCGC CATGTGGACG
CTTGAGTGGA TGGTTCTGCC GGCAATGATG ACCTGCACCG GAGCCGCACT CCGCCTCGCA
ACCCGGCAGG TGCAGGCAAT CACGCGCATC GGCGAGCCTC CCACCACGCG TTGA
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| Protein sequence | MNPLTSSNPY FAGLFADQEI TALFEGAATA DAFLAYEMAL TRAAAEVGQI DIGLAQRALA
AMVDFTPDVA ELQSDLSADG MAVPGYVRQL KAHVGAECVA AVHPGATSQD LIDTAQALAL
RAANEIYISR LTTLIDALRD LEETHGDNRL MGRTRMQAAL PISAGHRISS WISPLVRHTS
RLEILRPEVE ALQFGGPVGD GQRSQPHAAA MADHMGKALG LRAPERCWHT ERDSLVTYAG
WLSALTGSLG KFGQDVCLMV QQGVDALAQA GGGSSSAMAH KQNPVTAEML VTLSRYNAGQ
VALMHQASVH EQERSGAMWT LEWMVLPAMM TCTGAALRLA TRQVQAITRI GEPPTTR
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