| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0498 |
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| Symbol | |
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| ID | 4078244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 521348 |
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| End bp | 523696 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005794 |
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| Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein / xanthine oxidase |
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| Protein accession | YP_612493 |
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| Protein GI | 99080339 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.315875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGT CCACCCCCCT GCCCCATGAT GCCGCCGCCC TGCACGTCAC GGGCCAGGCC
CGCTACGTGG ATGACATCCC CACCCCCAAG GGCACACTGC ATCTTGCCTT TGGTCTTGCG
CCGATCGCCA GCGGCTCCAT CACCGCGATG AACCTTGCCG AGGTGCACGC TTCGGACGGT
GTGGTGGCAG TGCTGACCGC GGACGATCTG CCCTTTGACA ATGATGTTTC TCCCTCAGCC
CATGATGAGC CGCTCCTGGC CAAGGGCGAG GTGCACTACC TCGGCCAGCC CGTCTTTTTG
GTGGTTGCCA CCTCTCATCG CGCTGCACGC GTTGCGGCGC GCAAGGGCGA TATCGAATAC
CGCAAAACCG ACGCGCTCTT GAGTGTGGAG GCGGCACTGG CAGCAGACAG CCGCTTTGAA
GACGGCCCGC GCATCTATGA GAAAGGCGAT GCCCCCGCAG CCATTCAGGC CTCTTTGCAT
GTGATCGAAG ACAGCTTCGA CATTGGTGGT CAGGAGCATT TCTATCTCGA GGGTCAGGCG
GCGCTGGCGC TGCCGCAAGA AGATGGCGGC ATGATCGTCA ATTCGTCCAC CCAGCACCCA
ACCGAAATAC AGCACAAGGT GGCCGAGGCG ATTGGACTGC CGATGCACGC AGTCCGGGTC
GAGACCCGAC GCATGGGCGG CGGCTTTGGC GGCAAGGAAA GCCAGGGCAA TGCCCTGGCA
GTGGCCTGCG CCGTAGCCGC GCGCCTCACC GGCAAAGCCT GCAAGATGCG CTATGACCGC
GACGATGACA TGACCATCAC CGGCAAGCGC CACTCGTTCC GGATCTCTTA TCGCGCCGGT
TTTGACGCAG AGGGGCGGAT CACGGGCGTC GAGTTCACTC ATTTGGTCAA TTGCGGCTGG
GCGCAAGACC TGTCGCTACC GGTGGCAGAT CGCGCCATGC TGCATGCGGA CAACGCCTAT
GCAATCCCTG CGATCCGCAT TGAGAGCCAT CGGCTGAAAA CCAACCTGCA AAGCGCCACA
GCGTATCGCG GCTTTGGCGG CCCTCAAGGC ATGGTCGGCA TCGAGCGGGT GATGGATCAT
GCCGCACAGG TCTTGGGGAT GGATCCGGTC GAGCTGCGGG TACGCAACTA CTATGCCGCC
CCCCTTGCGT CCAAAGGGGG CTCTGCCCCC CGGTCTGCGA CCTCCCCCCG GGATATTTCT
GGAAAAGAGA AGGACAATAC CACTCCCTAT GGCATGGAAG TGATAGATTT CGAGCTGCAT
GAGATGACCG CGCAGCTCGT GAAATCCGCC GATTATGCCG CGCGCAAGGC GGAGATTTCG
GCCTGGAACG CGCGCCATGA CCGTTTGAAG CGCGGCCTGG CCTTCTCACC GGTGAAATTC
GGGATCTCCT TTACGCTCAC CCACCTGAAT CAGGCGGGCG CCTTGGTGCA CGTCTATCAG
GATGGCTCCA TCCATCTCAA TCACGGTGGC ACCGAGATGG GACAGGGGCT GTTTCAAAAG
GTGGCCCAAG TGGCGGCTGC ACGTTTTGGG GTCGACCTCG GGCGGGTGAA GATCACAGCG
ACTGACACCG CAAAGGTACC AAATACCTCG GCCACCGCAG CCTCCTCGGG CTCTGATCTC
AATGGGATGG CGGTGAAAGC CGCCTGTGAC ATCATTCGCG ACCGCATGGC GGCGCATCTG
GCCGAAGTCT ATCAACAGCC GCAATCCGCA GTTTCGTTTG AGAAGGATCA GGTGCGCATC
GGCTCTGAAC GGATCAGTTT TGAGGCGGCG GCGATGCAGT GTTACACGGG CCGGGTGAGT
CTCTCGGCAA CGGGGTTTTA CAAAACGCCC TCGCTGGAGT GGGACCGGAT CAAGGGAGCC
GGACGGCCGT TTTTCTATTT CGCCTATGGG GCAGCGATCA CCGAAGTGGT GGTCGACCGG
CTGACCGGCG AAAACCGCAT TCTGCGCGCC GATATCTTGC ATGATGCGGG CGCCTCGCTG
AACCCAGCAC TCGATATCGG ACAAGTGGAA GGCGCTTATG TTCAGGGCGC AGGCTGGCTC
ACGACCGAAG AGCTTGTCTG GGACGAGACC GGGCGACTTC GCACCCATGC GCCATCTACC
TACAAGATCC CGGCCTGCTC TGACCGGCCC GATGTGTTCA ACGTGGCGCT CTATGACGGA
TCAAACCGCG AAGAGACCAT CTATCGCTCC AAAGCGGTGG GCGAGCCACC GTTTATGCTG
GGCATTTCGG CCTGGCTTGC GCTCTCGGAT GCGGTGTCTC GTTTCGGCGA AGGGCATCCA
CATTTGAACG CGCCTGCGAC GGCGGAAGAG ATCTGGCGGG CAACAGAGAC ACTACGCCAT
GGGGTTTGA
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| Protein sequence | MSVSTPLPHD AAALHVTGQA RYVDDIPTPK GTLHLAFGLA PIASGSITAM NLAEVHASDG
VVAVLTADDL PFDNDVSPSA HDEPLLAKGE VHYLGQPVFL VVATSHRAAR VAARKGDIEY
RKTDALLSVE AALAADSRFE DGPRIYEKGD APAAIQASLH VIEDSFDIGG QEHFYLEGQA
ALALPQEDGG MIVNSSTQHP TEIQHKVAEA IGLPMHAVRV ETRRMGGGFG GKESQGNALA
VACAVAARLT GKACKMRYDR DDDMTITGKR HSFRISYRAG FDAEGRITGV EFTHLVNCGW
AQDLSLPVAD RAMLHADNAY AIPAIRIESH RLKTNLQSAT AYRGFGGPQG MVGIERVMDH
AAQVLGMDPV ELRVRNYYAA PLASKGGSAP RSATSPRDIS GKEKDNTTPY GMEVIDFELH
EMTAQLVKSA DYAARKAEIS AWNARHDRLK RGLAFSPVKF GISFTLTHLN QAGALVHVYQ
DGSIHLNHGG TEMGQGLFQK VAQVAAARFG VDLGRVKITA TDTAKVPNTS ATAASSGSDL
NGMAVKAACD IIRDRMAAHL AEVYQQPQSA VSFEKDQVRI GSERISFEAA AMQCYTGRVS
LSATGFYKTP SLEWDRIKGA GRPFFYFAYG AAITEVVVDR LTGENRILRA DILHDAGASL
NPALDIGQVE GAYVQGAGWL TTEELVWDET GRLRTHAPST YKIPACSDRP DVFNVALYDG
SNREETIYRS KAVGEPPFML GISAWLALSD AVSRFGEGHP HLNAPATAEE IWRATETLRH
GV
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