| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0493 |
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| Symbol | |
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| ID | 4078239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 515592 |
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| End bp | 516668 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005789 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_612488 |
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| Protein GI | 99080334 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00240976 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0511349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CCAAACTTCT TGCCAGTGCA GCGGTTGCAC TGGGTCTGGC CGCCGGTGGC
GCGCTGGCCG AGGACAAAAC CAAAGTCGGC TTTGTCTATG TTGGCCCCGT CGGAGATGGC
GGCTGGACCT ACGAGCACGA TCAGGGCCGC AAAGCGGTTG TCGAGGAGTT CGGCGACGCG
GTTGAAACCG TCTATGTTGA AAATGTTGCC GAAGGCCCAG ACGCCGAGCG CGTGATCACG
CAGATGGCTC TTCAGGGTGC GGATCTGATC TTCACCACCT CCTTTGGGTA CATGGATCCG
ACCATCAATG TCGCCAAGAA GTTCCCGAAC GTGAAATTCG AACACGCCAC CGGCTACAAG
CGCGCGGAAA ACGTGTCGAC CTACTCGGCC CGGTTCTACG AAGGTCGCGC CGTGCAAGGC
GTTATTGCGG GTCATATGAC CGAGAGCAAC ATCATCGGCT ACATTGGCTC TTATCCGATC
CCGGAAGTAA TTCGCGGCAT CAACTCGGCC TATATCCACG CCAAGAAAGT AAACCCCGAC
GTGCAGTTCA AGATCGTCTG GGCCTTCACC TGGTTTGACC CCGCCAAGGA AGCGGACGCT
GCGAAGGTGC TGATCGAGCA GGGCGCAGAT GTCATTCTGC AGCACACAGA CTCCACCGCC
CCGCAAGCCG CAGCGCAGGC CGCAGGCAAC GTGATCACCT TTGGTCAGGC CTCCGACATG
GCCGAGTATG CGCCCAAGCC GCGCGTCTCC TCCATCATCG ACAACTGGGC GCCCTATTAT
ATCGCGCGCA CCAAAGCGGT CATGGACGGC ACCTGGACGT CTGTTGACAC CTGGGACGGT
ATCGGCCCGG GCATGGTCGG TATTGGCGAG ATCACCGATG CGGTTCCTGA AGACGTCAAA
GCCGAAGCGC TGGCTCTGAA GGACGCGATC GCCTCTGGCG AATACCACCC CTTCACCGGC
CCGCTGAAAA AGCAGGACGG CTCGGTGTTC CTCGCCGAAG GTGAAACTGC GGACGACGGC
ACCCTTGCTG GCATGAACTT CTACGTTGAA GGCATCGAAG GCACGATCCC CGAATAA
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| Protein sequence | MKLTKLLASA AVALGLAAGG ALAEDKTKVG FVYVGPVGDG GWTYEHDQGR KAVVEEFGDA
VETVYVENVA EGPDAERVIT QMALQGADLI FTTSFGYMDP TINVAKKFPN VKFEHATGYK
RAENVSTYSA RFYEGRAVQG VIAGHMTESN IIGYIGSYPI PEVIRGINSA YIHAKKVNPD
VQFKIVWAFT WFDPAKEADA AKVLIEQGAD VILQHTDSTA PQAAAQAAGN VITFGQASDM
AEYAPKPRVS SIIDNWAPYY IARTKAVMDG TWTSVDTWDG IGPGMVGIGE ITDAVPEDVK
AEALALKDAI ASGEYHPFTG PLKKQDGSVF LAEGETADDG TLAGMNFYVE GIEGTIPE
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