| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0486 |
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| Symbol | |
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| ID | 4078524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 507703 |
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| End bp | 510210 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005782 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_612481 |
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| Protein GI | 99080327 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0493808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0384194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC AAGTCAAAGC ACTGGTCGTA GGCGGTGGCG CCGTCGGTAC TTCGATCGCA
TATCATCTGG CCAAGGCTGG TTGGGACGAT GTCATGCTGA TTGAGCGCGA CGAGCTGACG
TCCGGCTCCA CGTGGCACGC CGCTGGCCTT TTGCCACTGT TCAACATGTC CTATGCGACC
ACCCACATCC ACAAATACTC GGTGGATTTC TACAAGACGC TTGAGGAAGA GACCGGCCTC
AATGCGGGCT TTGCCGTTGT CGGCAACCTG CGTATGGCGC AGACGCAGGA GCGTATGGAC
GAGTATATGC TCTATGCCTC GACCGCCGAG ACCTGCGATG TGGCCTATGA GTGGCTCACT
CCGGAGCAGA TCAAGGAACG CTGGCCGCTC ATTGAGACCG GCGACCTCAA AGGCGCGATC
TACCACACCG AGGATGGCTA TATTAACCCC GCAGATGTGA CCCAGGCGAT GGCCAAGGGC
GCACGTCAGC GTGGTGTTGA GATCGTCCGC AAGATGCAGG CCGACGCCTT CCACTGGAAC
GGTACCCATT GGGAAGTGAC CTGCACCGTG ATGGCGGAAA AGGGCGGCAA TCTCGTGGAG
ACAGACGAGC AGGTGGTGAT CACTGCCGAG CACGTTGTCA CAGCCTCCGG CAACCACGCG
CAGCGCACGG CCAAGATGCT TGGCATCAAG ATGCCCGCAA TCCCGGTCGA GCACACGTTC
ATCGTGATGG ACAAAGATCC CGAACTGGTC AAATGGCGCG AAGCGGGCAA CCCCGAGCAC
CCGGTTATCC GCGACGCCGA CAATGAATCC TATGCCCGCG AAGAGCGCGG TGGCTGGATC
CTTGGCATCT ACGAGCACGG CGCCCCGGCG CGGTTTGAGC ATGGCGTACC GGACAGCTTC
CGTGCAGATC TGTTCCCGCT TGATCTGGAC CGGATTGCGG AACAATACAT GGCGATGGCG
GAGCGTGTGC CCTCCTGTGC TGACAGTGGT CTCAAGGACG ATTTCAACGG CCCGATCTGC
TACACGCCTG ATGGCAACCC GCTGGTCGGC CCGGCGCCGG GTCTGCGCAA CATGTGGCTG
GCCGAAGGCT TCTCCTTCGG GATCACCGCT GCAGGCGGCA CCGGCTATTA CCTCGCGCAG
ATGATGGTCG ATGGCGAAGC CGAGATCGAC ATGGCGTCGC TTGATCCCAA ACGCTACTCC
TCCAACTGGA TGACCACAGA GTTCGCGGCC CGCAAGAACG AAGAGTGCTA CGAGCACGTC
TACATTCTGC ACCACCCGGA CGAAGAACGC CCCGCTGCGC GCCCGCTGCG CACCGCGCCT
GCATTCGACC GCCAGAAAGC GCGCGGTGCA CAGTTTGGCT GGGTCAATGG ATGGGAACGT
CCGAACTACT TCGGCCCGGT GGATGCACCG GACAATTTTG ACGAAGAAGC ACGCTCCTTC
CGTCGTGGTG GCTGGTGGCA GCATGCCGTG GACGAAGCGA AGGCAATCCG CGAGGGCGTT
GGCCTCATTG ACGCGACCGC CTTTACGAAA CATGTCGTCA AAGGCCCCGG TGCCACCCAG
TTCCTCGACT GGTTCACCTG CAACAAGCTC CCGAAGGTTG GCCGCATCAA CCTGACCTAT
GCGCTGACCG CATTCGGTAC CACCCGCACC GAATACACCA TCGTGCGCAA CGGCGAGAAC
AACTACTATC TGGTCTCCGC CGGTGCGTGG TCCGAATATG ACGCCGACTT CCTGCGCAAG
GCGGCCGAGG ACAAGATGGA GGAATTCGGC TACATCGAGA TCCAGGATGT GACAACCCAG
TGGGGCGTCT TTGCCATCGC AGGGCCCAAG TCCCGCGATG TGCTGAAAGA GGTCATCGTG
GATGCCGATC CGGCGACTGC GCTCTCCAAC AAGCGCTTCC CGTGGCTGTC GGCCAAGCAG
ATCGAACTGG GCATGTGCCC GGTGAACGCG ATCCGCGTGG CCTATACTGG TGAACTGGGC
TGGGAACTCC ACCACCCGAT CGAGATGCAG AACTACCTCT TCGACCTCCT GGAAAAAGCG
GGCGAGAAAC ACGGTATGAA GCTCGTGGGC GCACGCGCTC AGAACTGGCT GCGTCAGGAG
AAATCCTACC GCGCCTTTGG CAACGAACTG GGCCGTGACG CGACCCCACT CGAAGCCGAC
CTGCCGCGCT TTGTCGACCT GGAGAAGGAC TTCCACGGCA AGGACAAGCT GGTCGAAACC
GGCGTCCGCG TGAAGTGCTG TACCCTGCTG ATCGATGGGC CAGAAGACGC CGATCCCTGG
GGTCGCGAGG CGCTCTATGC CGAGGATGGC ACCCGTGTGG GCCGCCTGAC CTCGGGTGGC
TACTCGGTCG CCTTCGAGAA ATCCATCGGC ATGGGCTACG TCAAACCCGA GATGGCTGTC
GAAGGCACCA AACTGAAAGT GAAGATCCAG GATAAGCTCT GGGATGCGGT TGTCACTTGC
GACAGCCCCT ATGATCCCAA GAACGAAACC ATCCGAAAGG ACGGTTGA
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| Protein sequence | MKTQVKALVV GGGAVGTSIA YHLAKAGWDD VMLIERDELT SGSTWHAAGL LPLFNMSYAT
THIHKYSVDF YKTLEEETGL NAGFAVVGNL RMAQTQERMD EYMLYASTAE TCDVAYEWLT
PEQIKERWPL IETGDLKGAI YHTEDGYINP ADVTQAMAKG ARQRGVEIVR KMQADAFHWN
GTHWEVTCTV MAEKGGNLVE TDEQVVITAE HVVTASGNHA QRTAKMLGIK MPAIPVEHTF
IVMDKDPELV KWREAGNPEH PVIRDADNES YAREERGGWI LGIYEHGAPA RFEHGVPDSF
RADLFPLDLD RIAEQYMAMA ERVPSCADSG LKDDFNGPIC YTPDGNPLVG PAPGLRNMWL
AEGFSFGITA AGGTGYYLAQ MMVDGEAEID MASLDPKRYS SNWMTTEFAA RKNEECYEHV
YILHHPDEER PAARPLRTAP AFDRQKARGA QFGWVNGWER PNYFGPVDAP DNFDEEARSF
RRGGWWQHAV DEAKAIREGV GLIDATAFTK HVVKGPGATQ FLDWFTCNKL PKVGRINLTY
ALTAFGTTRT EYTIVRNGEN NYYLVSAGAW SEYDADFLRK AAEDKMEEFG YIEIQDVTTQ
WGVFAIAGPK SRDVLKEVIV DADPATALSN KRFPWLSAKQ IELGMCPVNA IRVAYTGELG
WELHHPIEMQ NYLFDLLEKA GEKHGMKLVG ARAQNWLRQE KSYRAFGNEL GRDATPLEAD
LPRFVDLEKD FHGKDKLVET GVRVKCCTLL IDGPEDADPW GREALYAEDG TRVGRLTSGG
YSVAFEKSIG MGYVKPEMAV EGTKLKVKIQ DKLWDAVVTC DSPYDPKNET IRKDG
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