| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0461 |
|---|
| Symbol | |
|---|
| ID | 4078343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 479863 |
|---|
| End bp | 480354 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638005757 |
|---|
| Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
|---|
| Protein accession | YP_612456 |
|---|
| Protein GI | 99080302 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0756] dUTPase |
|---|
| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAT CGCAATTTGC GGTAGACGTG AAAATCATTG ACCCGCGTAT CCGGGATTGG
GGGATGCCCA GCTACCAGAC CCAAGGCTCT GCCGCGATTG ACCTTTTTGC CTGTATCGAC
GCGCCCAAAG AGATCGCGCC GCAGGCGCCT GCAGTGCTGA TCCCCTCGGG GCTGGCGTTT
TACATGGGCG ATCAGTCCTG CGCCGCGCTT GTGATGCCGC GGTCCGGGCT TGGTCACAAA
AAAGGGCTGG TGATGGGTAA TAATGTCGGC CTCATCGATG CCGACTATAC TGGCGAAGTG
TTCATCAGCG CCTGGAACCG CAACCCGCCG GGGGCCGCGC CGATCGTGAT CGAGCCGGGG
GAACGCATCG CGCAACTCAT GTTTGTGCCA GTTCTGCGGG CGACCTTGAA CGAGGTCGAG
ACATTCTCAA ACAGCACGGA GCGTGGTGCG GGCGGCTTCG GCTCGACCGG CTCGGGGGCG
ACCGGCGCAT GA
|
|---|
| Protein sequence | MTASQFAVDV KIIDPRIRDW GMPSYQTQGS AAIDLFACID APKEIAPQAP AVLIPSGLAF
YMGDQSCAAL VMPRSGLGHK KGLVMGNNVG LIDADYTGEV FISAWNRNPP GAAPIVIEPG
ERIAQLMFVP VLRATLNEVE TFSNSTERGA GGFGSTGSGA TGA
|
|---|
| |