| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0416 |
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| Symbol | |
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| ID | 4076176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 426222 |
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| End bp | 426857 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005711 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_612411 |
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| Protein GI | 99080257 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.168999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGTA TTACGCACCA TATCCCTGAC GAGTTGCTGA TAGCCTACGC GGCGGGCAGC
TTGACAAAGG CGTTTTCACT TGTGGTCGCC GCGCATGTTT CCATGTGTGA CGAATGCCGC
GCGCGCCTTG GCGCGCATGA GGCGCTCGGT GGCGCGCTCC TTGATGATAT GCCCGTGGCC
GAGGTTTCGG CGGATATGAA GGGACGGCTG TTTGACGCGC TCGACGATCC GGTTGCCCGA
GAAAAGCGCT ATGACCGGGC GGGGATTTTT CCTGCACCTG TCATGGAAGC CTTGGGGGGG
CTGCCGCCAA AGTGGAAGCC CCTCGGGCTC GGTGTGCGGC AGATGATCCT CGATCATGAT
CGCAGTGGCA GCGTGCGGCT TCTCTACATT CCGGCTGGAC AAGGGGTTCC GGATCATGGG
CACAACGGGC TGGAATTGAC CTTGGTACTG CAGGGCGCGT TTTATGACGA GACCGGACAT
TTTGGTGTCG GTGATCTGGA GGTTGCAGAT GGGGATCTGG AACATGAACC CGTCGCTGCT
GATGGTCCTG CTTGCATCTG TCTTGCTGCG ACGGATGCCT CGCTTCGGTT CCGCTCTTTT
GTGCCTCGCC TTTTGCAGCC GATTTTCCGG ATCTGA
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| Protein sequence | MTGITHHIPD ELLIAYAAGS LTKAFSLVVA AHVSMCDECR ARLGAHEALG GALLDDMPVA
EVSADMKGRL FDALDDPVAR EKRYDRAGIF PAPVMEALGG LPPKWKPLGL GVRQMILDHD
RSGSVRLLYI PAGQGVPDHG HNGLELTLVL QGAFYDETGH FGVGDLEVAD GDLEHEPVAA
DGPACICLAA TDASLRFRSF VPRLLQPIFR I
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