| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0368 |
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| Symbol | |
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| ID | 4077698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 377973 |
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| End bp | 378989 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005663 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_612363 |
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| Protein GI | 99080209 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TACTGCTGAC CACCATTGCC GGTGTGGGCT TGCTGGCGGG TGCTGCGCAA
GCGGATGAAA AGGTGACGGC CTGCCTGATC ACCAAAACGG ATACCAACCC GTTCTTTGTC
AAAATGAAAG AAGGGGCGAC CGCCAAGGCC GAGGAACTGG GCATGGAGCT CAAGGCGTTT
GCGGGCAAGA TCGACGGGGA CCATGAAACC CAGGTGGCCG CGATTGAGAC CTGCATTGCA
GACGGCGCCA AGGGTATCCT GCTCACCGCG TCTGATACGT CTTCGATTGT ACCCGCTGTT
CAGCAGGCGC GCGATGCGGG CCTCGTGGTG ATCGCACTCG ATACACCTCT CAACCCGATT
GATGCGGCTG ATGCGACCTT TGCCACCGAC AACTTCCTTG CCGGCGAGCT GATTGGCCAG
TGGGCGGCGG CGGCCCTTGG GGATGACGCG GCCAATGCCA AGATTGGCAT GCTCGATCTG
GCCGTGAGCC AGCCCACCGT CGGCGTGCTG CGCGATCAGG GCTTCTTGCA GGGCTTTGGC
ATCGACATCG GGGACCCCAA CAAATGGGGT GACGAGACCG ACCCGCGGAT CGTCGGCAAT
GACGTCACGG CGGGCAATGA GGAAGGTGGC CGCAAGGCGA TGGAGAATCT TCTCGCCAAA
GATCCAATGA TCAACGTGGT TTACACCATC AACGAGCCTG CCGCTGCCGG GGCCTATGAG
GCGCTGAAGT CCATCGGTCG GGAAAACGAT GTGCTCATCG TCTCCGTCGA TGGCGGCTGC
CCTGGCGTGC AGAACGTCAA GGATGGCGTG ATCGGCGCCA CCTCGCAGCA ATACCCGCTG
ATGATGGCCT CGCTGGGCGT TGAGGCGATT AAGAAATGGG CCGAAGAAGG CGTGAAGCCG
GAGCCTACTC CGGGCAAGGC GTTCTTTGAC ACCGGCGTTG CGCTGGTGAC GGACCAGCCG
GTTGACGGTG TTGAAAGCAT CGACACCACA GAGGGCACCA ACCTCTGCTG GGGCTGA
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| Protein sequence | MKKLLLTTIA GVGLLAGAAQ ADEKVTACLI TKTDTNPFFV KMKEGATAKA EELGMELKAF
AGKIDGDHET QVAAIETCIA DGAKGILLTA SDTSSIVPAV QQARDAGLVV IALDTPLNPI
DAADATFATD NFLAGELIGQ WAAAALGDDA ANAKIGMLDL AVSQPTVGVL RDQGFLQGFG
IDIGDPNKWG DETDPRIVGN DVTAGNEEGG RKAMENLLAK DPMINVVYTI NEPAAAGAYE
ALKSIGREND VLIVSVDGGC PGVQNVKDGV IGATSQQYPL MMASLGVEAI KKWAEEGVKP
EPTPGKAFFD TGVALVTDQP VDGVESIDTT EGTNLCWG
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