| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0327 |
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| Symbol | |
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| ID | 4076223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 331873 |
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| End bp | 333141 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638005622 |
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| Product | amidase |
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| Protein accession | YP_612322 |
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| Protein GI | 99080168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG TCCTCGAGGC CACCCAAGAG GCGCTGAGCC GCGCCGAGCA AGCGCCGGAG
GTGTTCCTGT CGCGCTTGCC GGAGCGCGCC CGCGCAGAAG CCCGAGAAAG CGCGGCGCGT
CGCTCCAAGC TGGGCCCGCT TGATGGGGCG ACAATCTCCT GGAAGGACAT GATTGCCCTA
AAGGGTGTCG CGGCGCGTGC AGGCGCGGCC CATGACCCGA AGCTGGCGCC CGCCGTTTCG
GATGCAGACG TCGTGACCCG TGCGCGCAGG GCGGGGCTTG TCAGCATCGG TATCACCAAC
CAGTCCGAGC TTGCGTTTTC CGGGATCGGT TACAATCCGC ATCACGGCAC CCCGCTCCTT
GAGGGGCGGG TGCCGGGGGG ATCGTCCTCG GGAGCGGCGG CTTCGGTGGC GCGGGGGATC
ACCCGGCTCG CGGTGGGCAC GGATACCGCT GGCTCTTGCC GGGTGCCAGC GGCGTTTCAG
GGCGTGGTGG GCTTTCGCCC CACACGCGGG CGCTACCCGA TGGCGGGGGT GATGCCGCTT
GCCCCGAGTT ACGACACCGT AGGCGGCTTT GCCCGCTCGG TGAGTGACAT GATCGCGCTG
GATGCGGTGC TCTCGGGCGA TGAGACCTGT GCGGATGCGG CCAGCAGCCT TGGGGTGCTC
CATGAGGTGC TTGGGGCTGG TGATGTGGCT ACAGGGGTCG CGGCGTCTTT CAAAGCGGCG
GTGGTCCGAC TTGCTGAGGC GGGGCTGAAG ATGGAGCGCG CCAGACAGTC GCCCCTTCTG
GACGCATTGG CGCTGATCGC TGCAGGGGGC TGGCCCGGCG CGCGTGAGGC GGTGGACACC
TACGGGCATC TGTTGGCTCC CGAGACGGCT CTGCGCCTTG ACCCCTTTGT TGCGGAGCGG
TTGCGTGTGT CGGCCCGCCT GGACCGCGAA CCACTCGAAA AGGTCAAAAG GCAGGCCTGC
AGTCTGCGCG CCAGGATGCA GACCGAAGAC ACCCTCTATG TGTTGCCCAC CGTCGCCATC
GAGGCGCCCC TTCTGGCGCC GCTCTTGGCA GACCCGGAGG CCTTTGCCGC CACCAATGCC
GCTGCCCTGC GCCTGACGAT GCCTGCCAGC CTGCTCGATT TGCCAGCGAT CTCGCTGCCC
ATCGGCCAGA CGGAGGCGGG CTGCTGGGTG GGCCTGCAGC TGGTCGGGCC GCCACATAGC
GACCGTCGTC TGCTCGCGAC ATCACAAACG GTCGAAAAGC TGTTGATGAG AAAGGATAAG
CTCAGATGA
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| Protein sequence | MSAVLEATQE ALSRAEQAPE VFLSRLPERA RAEARESAAR RSKLGPLDGA TISWKDMIAL
KGVAARAGAA HDPKLAPAVS DADVVTRARR AGLVSIGITN QSELAFSGIG YNPHHGTPLL
EGRVPGGSSS GAAASVARGI TRLAVGTDTA GSCRVPAAFQ GVVGFRPTRG RYPMAGVMPL
APSYDTVGGF ARSVSDMIAL DAVLSGDETC ADAASSLGVL HEVLGAGDVA TGVAASFKAA
VVRLAEAGLK MERARQSPLL DALALIAAGG WPGAREAVDT YGHLLAPETA LRLDPFVAER
LRVSARLDRE PLEKVKRQAC SLRARMQTED TLYVLPTVAI EAPLLAPLLA DPEAFAATNA
AALRLTMPAS LLDLPAISLP IGQTEAGCWV GLQLVGPPHS DRRLLATSQT VEKLLMRKDK
LR
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