| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0302 |
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| Symbol | |
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| ID | 4077125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 308089 |
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| End bp | 308820 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005596 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_612297 |
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| Protein GI | 99080143 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.198401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCA AAACCCTGCT CTTGACCGGA GCCAGCCGGG GCATCGGCCA TGCCACCGTG
CGCCGGTTCA ACGCCGAGGG ATGGCGGGTG ATTACCTGTT CACGCCAACC GTTTCCCAAG
GAATGCCCCT GGGGCGGCGG CGAGGAAAAC CATGTGCAGC TGGATCTGTC GGACCCCTCG
GATACCATCA ATGCGGTTGG TGTCATTCAG GAACGTCTGG AGGACGGCAG GCTTGACGCT
TTGGTCAACA ACGCGGGTAT CTCGCCCAAG GGCCCCGATG GCGAGCGGCT GAGCACGCTC
AACACCGATC TGATGGATTG GGCCAAGGTG TTTCACGTCA ATTTCTTTGC CTCGGTGGTG
CTGGCGCGCG GCCTGCGCGA GGAACTGGCC GCGGCCAAGG GGGCAGTGGT CAATGTGACC
TCGATTGCGG GCAGTCGGGT GCATCCTTTT GCGGGGGCGG CCTATGCCAC CTCAAAGGCG
GCGCTGGCGG CGCTGACGCG CGAGATGGCG CATGACTTCG GGCCGATGGG CGTGCGCGTA
AATGCGATTG CGCCGGGCGA GGTGGAGACC TCGATCCTCA GCCCTGGCAC CGACAAGATC
GTGGAAAAGC TGCCGATGCG CAGGCTTGGC CAGCCCTCCG AGGTGGCGGA TGCGATCTAT
TTCCTGTGCT CGGAGAAGAG CAGCTATATT TCCGGCACCG AGATCGAGGT GAACGGCGCG
CAGCACGTCT GA
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| Protein sequence | MRRKTLLLTG ASRGIGHATV RRFNAEGWRV ITCSRQPFPK ECPWGGGEEN HVQLDLSDPS
DTINAVGVIQ ERLEDGRLDA LVNNAGISPK GPDGERLSTL NTDLMDWAKV FHVNFFASVV
LARGLREELA AAKGAVVNVT SIAGSRVHPF AGAAYATSKA ALAALTREMA HDFGPMGVRV
NAIAPGEVET SILSPGTDKI VEKLPMRRLG QPSEVADAIY FLCSEKSSYI SGTEIEVNGA
QHV
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