| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0294 |
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| Symbol | |
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| ID | 4077429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 300335 |
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| End bp | 301351 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005588 |
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| Product | lysine-arginine-ornithine-binding periplasmic protein |
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| Protein accession | YP_612289 |
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| Protein GI | 99080135 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATT CCGTATTCTT TGGCGCGCTG ACCGTGGCCG GTCTCGCAGC CGGTGCAGCC
GCAGCCGGCA CGCTTGACGA CGTCAAGGCA CGCGACAAAC TGAACTGCGG GGTCTCCACC
GGTCTGGTCG GCTTTTCTGC GCCGAACGCG AACGGTGAGT GGGAAGGCTT TGACATCGCG
GTCTGCCGCG CTGTTGCTGC AGCCGTCCTG GGTGACCCGA GCAAGGTCGA ATACGTGCCG
ACCACCGGCA AGACCCGCTT CACCGCACTG GCCTCCGGCG AGATCGACAT GCTGGCCCGC
AACACCACAT GGACCTTCAG CCGCGACGTT GACCTGAAGT TCGAATTCGT CGGCGTGAAC
TACTACGACG GTCAGGGCTT CATGGTCCCC AAAGAGCTGG GCGTGTCCTC CGCCAAGGAG
CTGGACGGCG CAACTGTCTG CATTCAGACC GGTACCACCA CCGAACTGAA CCTCGCGGAC
TTCTTCCGTG CCAACAACAT CTCCTATGAG CCGGTTCCGA TCGAGACCAA CGCAGAAGCG
CGCCAGCAGT ATCTGGCCGG TGCTTGCGAC GTCTACACCA CCGACGCATC CGGTCTGGCG
GCAACCCGCG CGACCTTTGA CGACGCAGCA AACCACGTGA TTCTGCCGGA GATCATCTCC
AAAGAGCCGC TCGGCCCGCT GGTCCGTCAC GGTGACAACG AGTGGGGCGA CGTTGTGCGC
TGGACTCTGA ACGCAATGAT CGCAGCTGAA GAGCTGGGCA TCACCTCCGC AAACCTGGCT
GAGAAAGCTG CAGGTACCGA CAACCCGGAA ATCAACCGTC TGCTCGGCAC CGAAGGCACC
CTCGGCGAGA TGCTTGGCCT GGAAGCTGAC TTTGCTCAAA AAGCGCTGGC CGCTGGCGGC
AACTACGGTG AGATCTTTGC CAAGACCATC GGCGAAGACA CCCCGGTTGG CCTGGCGCGT
GGTCTGAACG CACAGTGGAC CGATGGTGGC CTGCTCTACG CACCGCCGTT CCGTTAA
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| Protein sequence | MNNSVFFGAL TVAGLAAGAA AAGTLDDVKA RDKLNCGVST GLVGFSAPNA NGEWEGFDIA
VCRAVAAAVL GDPSKVEYVP TTGKTRFTAL ASGEIDMLAR NTTWTFSRDV DLKFEFVGVN
YYDGQGFMVP KELGVSSAKE LDGATVCIQT GTTTELNLAD FFRANNISYE PVPIETNAEA
RQQYLAGACD VYTTDASGLA ATRATFDDAA NHVILPEIIS KEPLGPLVRH GDNEWGDVVR
WTLNAMIAAE ELGITSANLA EKAAGTDNPE INRLLGTEGT LGEMLGLEAD FAQKALAAGG
NYGEIFAKTI GEDTPVGLAR GLNAQWTDGG LLYAPPFR
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