| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0242 |
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| Symbol | |
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| ID | 4076002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 262178 |
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| End bp | 263353 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005536 |
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| Product | elongation factor Tu |
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| Protein accession | YP_612237 |
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| Protein GI | 99080083 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.333301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.775669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG AAAAGTTTGA ACGTAATAAA CCGCACGTCA ACATCGGCAC CGTTGGCCAC
GTTGACCACG GTAAAACCAC GCTGACCGCA GCAATCACCA AATACTTCGG CGACTTCAAG
GCATACGACC AGATCGATGG CGCGCCGGAA GAAAAAGCGC GTGGTATCAC CATCTCCACC
GCCCACGTGG AATACGAAAC CGAAGGCCGT CACTACGCAC ACGTCGACTG CCCCGGCCAC
GCTGACTATG TGAAAAACAT GATCACCGGT GCGGCGCAGA TGGACGGCGC GATCCTGGTT
GTGAACGCAG CCGACGGCCC GATGCCCCAG ACCCGCGAGC ACATCCTGCT GGCGCGTCAG
GTTGGCGTTC CCGCGCTGGT CGTGTTCATG AACAAAGTGG ACCAGGTCGA CGACGAAGAG
CTGCTCGAGC TCGTCGAGAT GGAAATCCGC GAATTGCTGT CGTCCTACGA CTTCCCCGGC
GACGATATCC CGATCATCGC AGGTTCCGCT CTGGCGGCGA TGGAAGGCCG TGACCCGGAA
ATCGGCGAAA ACAAGATCAA GGAACTGATG GCGGCTGTGG ATGAGTACAT CCCGACCCCC
GAGCGCGCTG TTGACCAGCC GTTCCTGATG CCGATCGAAG ACGTGTTCTC GATCTCTGGC
CGTGGTACCG TTGTGACCGG TCGTGTTGAG CGTGGCGTGA TCAATGTTGG CGACAACATC
GAAATCGTTG GCATCAAAGA CACCACCACC ACCACCTGTA CCGGTGTGGA AATGTTCCGC
AAGCTGCTGG ACCGCGGTGA AGCAGGCGAC AACATCGGCG CCCTGCTGCG TGGTATCGAC
CGTGAAGCGG TTGAGCGTGG CCAGGTTCTG TGTAAGCCGG GCTCCGTGAC CCCGCACACC
AAATTCGAGG CAGAAGCTTA TATTCTGACC AAAGAAGAAG GTGGCCGTCA CACCCCGTTC
TTTGCGAACT ACCGTCCGCA GTTCTACTTC CGCACCACCG ACGTGACCGG CACCGTGACC
CTGCCGGAAG GCACCGAAAT GGTGATGCCG GGCGACAACC TGAAGTTCGA AGTTGAACTG
ATCGCCCCGA TCGCAATGGA AGACGGTCTG CGTTTCGCGA TCCGCGAAGG CGGCCGCACC
GTTGGCGCGG GCGTTGTGTC CAAGATCCTC GCGTAA
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| Protein sequence | MAKEKFERNK PHVNIGTVGH VDHGKTTLTA AITKYFGDFK AYDQIDGAPE EKARGITIST
AHVEYETEGR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLARQ
VGVPALVVFM NKVDQVDDEE LLELVEMEIR ELLSSYDFPG DDIPIIAGSA LAAMEGRDPE
IGENKIKELM AAVDEYIPTP ERAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDNI
EIVGIKDTTT TTCTGVEMFR KLLDRGEAGD NIGALLRGID REAVERGQVL CKPGSVTPHT
KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVT LPEGTEMVMP GDNLKFEVEL
IAPIAMEDGL RFAIREGGRT VGAGVVSKIL A
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