| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0229 |
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| Symbol | rplK |
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| ID | 4076262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 243929 |
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| End bp | 244354 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005523 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_612224 |
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| Protein GI | 99080070 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0737159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AGCTTGTTGG TTCGATGAAG CTGCAGGTTC CTGCAGGTCA GGCAAACCCA
TCCCCGCCAG TTGGCCCCGC ACTGGGTCAG CGCGGCATCA ACATCATGGA ATTCTGCAAG
GCGTTCAACG CCAAGACCGC AGACATGGAG CCCGGCGCTC CGTGCCCGAC CGTGATCACC
TACTATCAGG ACAAGTCCTT CACCATGGAC ATCAAGACGC CGCCCGCGTC TTACTACCTG
AAGAAGGCTG CAAAGATTAA ATCCGGCGCG AACAACCCGA GCCGTGAGAC CGCAGGCACC
GTCACTGCCG CTCAGGTGAA AGAGATCGCC GAAGCGAAGA TGAAAGATCT GAACGCGAAC
GACATCGAAG CCGCGATGCA GATCATCCTG GGCTCCGCCC GCTCCATGGG CATCGAGGTG
AAGTAA
|
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| Protein sequence | MAKKLVGSMK LQVPAGQANP SPPVGPALGQ RGINIMEFCK AFNAKTADME PGAPCPTVIT
YYQDKSFTMD IKTPPASYYL KKAAKIKSGA NNPSRETAGT VTAAQVKEIA EAKMKDLNAN
DIEAAMQIIL GSARSMGIEV K
|
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