| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0205 |
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| Symbol | |
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| ID | 4078653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 222662 |
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| End bp | 223507 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005499 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612200 |
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| Protein GI | 99080046 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.131478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA TTCCATCCCT TGATGATCTC GACCTATTTG CACGCATCGC TCAGGCGGGC
GGCTTGGCTG TGGTTGCACG GCAAAGCGGA GTGAGCGTGC CAACCCTCAG CCGTCGCATG
CGCGCGCTCG AACTTCAGAT CGGAGTACAT TTGTTTGAGC GTGGCTCTCA CGGTTATCGC
GTGACTGCGC TGGGGCGGGC ATTTCTGAGC GAGACGCGCG CGTTTCAAGC GGAGGCGCAA
CGTCTGCGGC GGATGGTTGC GACGCCTCTG ATGGCAGAGG TTCGCATTAC TGCGGGCAGT
TGGACCTCTG CTTTTCTGGC GCAGCAGTTG CCGCGCTTCT GGCAGGAGGA CGCGCAGTGG
CGTCCGGCCT TTCTGGAGGC TGATACGCGG CTGGATATCG CGCGGCGTGG GGCAGATATT
GGCATACGGA ACCAGCGTCC TGAGCAAGCC TGGCTGGCTG GGCGGTACAC CGGTTTGATT
ACCTATGCGG TTTACGCGAT CTCTGATCAG GTGCGAGGCT ATGTCGTTTT GCCTGAGAAC
CAGGCAAAAA CGCCATCCGC AAGATGGGTA TGGTCGCACC ATGGCGGCGA GGTCGCGGCG
ACGGCGCGTA GCCCACGCAT GGTGGCTGAT CTGGCCTGTG CCGGAGTGGG GCAGGTGGTG
CTGCCTCGGT TTGCAGCGGC CATGTTTCCG GCCTTGCAGC AAGTTGGCCC AGAAATTGCG
GAGCTCTCGC ATGAGGAATG GCTGGTCTGT CATCACGACG GTCGGCATGA TCCACCTGTG
CGGGCTGCGC TAGAGGGGAT CGCAGCTGTG CTGACCGATA CAACCCTGCG CCCTATAGGA
GCTTGA
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| Protein sequence | MKSIPSLDDL DLFARIAQAG GLAVVARQSG VSVPTLSRRM RALELQIGVH LFERGSHGYR
VTALGRAFLS ETRAFQAEAQ RLRRMVATPL MAEVRITAGS WTSAFLAQQL PRFWQEDAQW
RPAFLEADTR LDIARRGADI GIRNQRPEQA WLAGRYTGLI TYAVYAISDQ VRGYVVLPEN
QAKTPSARWV WSHHGGEVAA TARSPRMVAD LACAGVGQVV LPRFAAAMFP ALQQVGPEIA
ELSHEEWLVC HHDGRHDPPV RAALEGIAAV LTDTTLRPIG A
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