| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0140 |
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| Symbol | |
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| ID | 4078807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 153323 |
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| End bp | 153679 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638005434 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_612135 |
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| Protein GI | 99079981 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00670241 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTGC GTGTCCCGAT CCTCAGTCAA GGAGAGTTGC TCATCGCCTC GATCCAGGAG
GAGTTGTCAG ATAGTGAGAT CCTTGATCTG CAGGCCCGTA TTCTGGATGA GGTCGCCGCC
AAGAAGGCGC GAAACGTTAT CGTCGATGTC AGCTTGCTTG ACGTCCTCGA TAGCTTTGGA
ACAAGAACAC TGTCCGAAAT CGCGGCAGCG GTCCGCTTGA GAGGAGCCCA AATGGTCATT
GTTGGCATTC AGCCCGAAGT GGCCATGGCC ATGGTTCTCC TGGGCCTGTC GCTAGAAGGC
GTGCCAACAG CACTTGATCT CGACCATGGC ATCGAACTTC TGAAAGCCAG ACCATGA
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| Protein sequence | MALRVPILSQ GELLIASIQE ELSDSEILDL QARILDEVAA KKARNVIVDV SLLDVLDSFG
TRTLSEIAAA VRLRGAQMVI VGIQPEVAMA MVLLGLSLEG VPTALDLDHG IELLKARP
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