| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0051 |
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| Symbol | |
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| ID | 4078714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 53960 |
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| End bp | 54646 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005338 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_612046 |
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| Protein GI | 99079892 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.480932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGT TGAAGAAGAT CCTGCTCGTC GACGATGACG AGGACCTGCG CGAGGCGCTG
AGCGAACAGC TTGTTATGAC CGAAGATTTC GACGTCTTCG AAGCCGGCGA TGGCCAAGGA
GCGATGGAGC GCGCGAAGGA AGCGATCTAT GACCTGATCA TCCTCGACGT GGGCCTGCCA
GATACGGATG GGCGTGAACT ATGCCGCCTG ATGCGCAAGC AAGGGGTTAA ATCCCCAATC
CTCATGCTGA CCGGTCATGA CAGCGACGCC GATACCATTC TGGGACTGGA TGCAGGCGCC
AATGACTACG TGACCAAGCC GTTCAAGTTC CCGGTGCTTT TGGCGCGTAT CCGGGCCCAG
CTTCGCCAGC ACGAACAATC GGAGGACGCG GTCTTTGTGC TCGGCCCCTA TACTTTCAAG
CCCGCGATGA AGATCCTGAT CACCGAAGAC GAGCGCAAGA TCCGGTTGAC CGAGAAGGAA
ACCAATATTC TGAAGTTCCT CTATCGCTCC AACAATGGGG TGGTGCCGCG GGATGTCCTG
CTGCACGAGG TCTGGGGCTA CAATGCGGGG GTGACGACGC ACACGCTCGA GACCCATATC
TACCGCCTGC GCCAGAAAAT TGAGCCCGAT CCGTCGAATG CGCGGCTTCT GGTGACGGAA
TCAGGCGGTT ACCGGCTCGT GGCCTGA
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| Protein sequence | MAQLKKILLV DDDEDLREAL SEQLVMTEDF DVFEAGDGQG AMERAKEAIY DLIILDVGLP
DTDGRELCRL MRKQGVKSPI LMLTGHDSDA DTILGLDAGA NDYVTKPFKF PVLLARIRAQ
LRQHEQSEDA VFVLGPYTFK PAMKILITED ERKIRLTEKE TNILKFLYRS NNGVVPRDVL
LHEVWGYNAG VTTHTLETHI YRLRQKIEPD PSNARLLVTE SGGYRLVA
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