| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0024 |
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| Symbol | |
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| ID | 4076291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 24823 |
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| End bp | 25581 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005311 |
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| Product | ABC transporter related |
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| Protein accession | YP_612019 |
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| Protein GI | 99079865 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00950535 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.420698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC CAAAACTAGA AGTCACCTCC GGCTCGTCGG GTCTGCGCAT TGAGAAGATG
CGCAAAAGCT ATCGCAAACG TGTGGTGATC CGTGACGTCT CGATGGAACT GAACCGCGGT
GAGGTCGTGG CCTTGCTGGG GCCAAACGGC TCGGGCAAGA CCACGAGTTT TTATACCATT
GCCGGGCTGG TTTTCCCCGA AGCTGGGCGC GTCACACTGG ACGGGCAGAA TGTCACCTCG
CTGCCGATGT ATCGCCGCGC CCGACTGGGT ATCGGCTATC TGCCCCAGGA AATGTCGATT
TTTCGCGGCC TTTCCGTCGA GGACAACATC TCGGCCGTTC TGGATATTGC CGTTTCTGAC
GATCACAAAC GTCGCGAGCG CCTAGAAGAG CTGCTGTCGG ATTTTTCGAT CGAGCATCTG
CGCCGCGCAC CCGCGCTGGC GCTGTCCGGT GGCGAACGGC GCCGGGTCGA GATCGCGCGT
TGTCTCGCGG CCGATCCCAA ATATCTTCTG CTGGATGAAC CCTTTGCAGG TGTTGATCCA
ATCTCTGTTG GCGACATCCG CAACCTCGTT GCAGACTTGA AGAACCGCGG CATTGGCGTC
CTCATTACGG ACCACAATGT GCGCGAAACG CTCGAAATCG TGGACCGGGC CTATATCCTG
CATGATGGGC AGGTCCTGAT GTCCGGCAGC CCCTCGGAAG TGGTCGAGAA CGAAAACGTC
CGGCGGGTCT ACCTCGGTGA CAACTTCCGG ATTTCCTGA
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| Protein sequence | MAKPKLEVTS GSSGLRIEKM RKSYRKRVVI RDVSMELNRG EVVALLGPNG SGKTTSFYTI
AGLVFPEAGR VTLDGQNVTS LPMYRRARLG IGYLPQEMSI FRGLSVEDNI SAVLDIAVSD
DHKRRERLEE LLSDFSIEHL RRAPALALSG GERRRVEIAR CLAADPKYLL LDEPFAGVDP
ISVGDIRNLV ADLKNRGIGV LITDHNVRET LEIVDRAYIL HDGQVLMSGS PSEVVENENV
RRVYLGDNFR IS
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