| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2887 |
|---|
| Symbol | |
|---|
| ID | 8829299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013930 |
|---|
| Strand | + |
|---|
| Start bp | 238764 |
|---|
| End bp | 239579 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003494838 |
|---|
| Protein GI | 290243168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTGC TGTGCCGGAC CCTGCGGGTC TCCCGGAGTG GATTCTACCA ATGGCGCCAG
CGCGAGGATG CGGCTGATCC GATCCATGCC GAGCTGCTGT GGCATGTGCG TTCGGTGGAC
CAGCACTTAC GCCACCGAGC GGGGAGCCGC CGGATGGCAT ATGAGCTGCG CCAACGGGAC
TTTGCCGTGG GACGGCACCG GGCTCGGAGC CTGATGCGGG AAGCCGGTCT CGAGTGTCAG
CAGCGCCGTC GGCGGTGGAT CTCGACGACC GACAGTCAGC ACCGCTTACC GGTGGCCCCG
AACGTGCTGC GGCGCCAGTT CCGGGCTGAA GGGCCCAACG AGATCTGGGT GGCCGATATC
ACGGCGCTGT GGACCTTCGA AGGCTGGGTC TATCTGGCGG CGATCCTGGA CCTGTATGAC
CACCAGGTCA TCGGTTATGC CCTGGCCGAC GGCATGCCGG TGGAGCTGAC CCTGGAGGCG
CTGGAGATGG CGGTCCGGCA CCGGCGACCG GCGCCGGGGC TCATCCATCA CTCGGATCAG
GGTAGCCAGT ATGCCGCCAC GCGCTACCAG GAACGGCTGG ATGCGTTGGG CTTCGTGCCC
TCCATGAGCC GCAAGGGCAA CTGCTGGGAC AACGCGGTGA TGGAGCGCTT CTTCGGCGCA
CTGAAAAGCG AGTGGACCGA CGCCCGGACC TACCGTACCC GCGAGGCCGC CCGACTGGAT
GTCGTGGAGT ACATCGAAAT GCAGTACAAC AGCGTCCGAC CCCACACGGC CCTGGGCCAA
CTTACCCCCC GGGAGTGGGA AAAGGCTGTT GCTTAG
|
|---|
| Protein sequence | MTLLCRTLRV SRSGFYQWRQ REDAADPIHA ELLWHVRSVD QHLRHRAGSR RMAYELRQRD
FAVGRHRARS LMREAGLECQ QRRRRWISTT DSQHRLPVAP NVLRRQFRAE GPNEIWVADI
TALWTFEGWV YLAAILDLYD HQVIGYALAD GMPVELTLEA LEMAVRHRRP APGLIHHSDQ
GSQYAATRYQ ERLDALGFVP SMSRKGNCWD NAVMERFFGA LKSEWTDART YRTREAARLD
VVEYIEMQYN SVRPHTALGQ LTPREWEKAV A
|
|---|
| |