| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2855 |
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| Symbol | |
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| ID | 8829267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 209523 |
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| End bp | 210995 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003494806 |
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| Protein GI | 290243136 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.370108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.352738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCTTG GCGATTATCT GGTTGAGCAA GGGCTGCTTG AGGCAAGTCG TCTCAAGGCC
GCCCTGGCCG AGCAATCGGT CACAGGCGAG CATCTGGGGC GTATCCTCGT ACGCAACGGC
TTTATTCGCC AGGACACGCT CGTCAGCACC TTGCGACGGA CGAATCCGGC CATGCTCATG
CGCGAGTCCA CCTTGCTGCC GGGGATGGAT GCGGAAGTGC TGGCGGAAAC CCGCAGCATG
ATCATCGCGG AGCTACCGGA CATCGTCTAT GTGGCGACCC TCAATCGGAC CGGCGAGGTT
CGTCGCAAGC TGACCCCGTA CATGGGAGGC CGCGACATCG CCTTTGTCGC GGCCTCGCCG
CAGCGCGTCG ACGAATACCT GGAACTGGCA CAACGCGCGT CGTCGGAAGA CGGCGGGGTA
CTGGAGAAAA TGATCCGCCG CGCGCTCAAC GAGAACGCAT CGGACCTTCA TATCATCCCC
CGGACACACA GCTACACCGT GCTGTCGCGC CGACTCGGGG TGCGCGAGCT GACACACGAG
GGGGCGCTTG AGGAGTACCA GTCGCTTGCG GCTCAGATCA AGGACCGCTC TCGGATGGAC
ATGGCCGAGC GCCGGGTCCC GCAGGATGGC GGTTTCTCGA TTGAGCACAA CGGCCGAGTC
GTTGACATGC GTGTCGCGAC GCTCCCGACC ACCGAGGGCG AGAGTATTGT CATTCGGCTT
CTGGATCCCG ACCGGGTGAA CCCGGTGCTG GATACGCTCG GTATCACGCG GATCGATGAA
TTCCGCAAGG CCATGAACCG GGCGGAAGGG CTCTGTCTAA TCTGCGGCCC CACCGGGTCC
GGGAAGACCA CCACCCTGAA CGCGGCCGTC CGCGAAATGG AAGTGCTCGA GTCCGCGATC
TACTCGATCG AGGATCCCGT CGAATACCGC ATCCCGTATG TTGGCCAGGT CGCCATCAAC
GACACGGTGG GTCTCGACTT TGCGCGTGGT GTGCGCGCCT TCATGCGTTC CGACCCGGAT
GTAGTCATCG TCGGGGAAAT ACGTGACCTG GAGACCGCCC GCAACGCGAT CAAGGCGGCC
GAAACCGGCC ACATGGTGCT GGGTACCCTG CATACGGCAT CGGTCCACGG GGCCATCGGG
CGGCTTCGGG ATATTGGCGT GGAATCGCAT GAGCTTCGCT ACCTGCTGCG CGGCGTGATG
GCGCAGCGCC TGGTGCGCAC CTTGTGCAAG TCGTGCGGGG GCAAAGGATG CAGCCTCTGC
CGAGAGTCGG GCTATGCCAG CCGGACGATT GTGTCGGAGA CCGCATATCT CCCGGATGTG
GAGTCGGTCG ACAAAGTGAT CCAGGGTGAA CGCTGGTGGC CAAGCATGGC GGAGGATGTG
ATCACGAAAG TTCACGCCGG GGAAACCGAT GAGCGCGAGG TGCATCGCGT ATTCGGTGCC
GAGATCGATG TCGCATCGAG CAAGGCCGCC TGA
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| Protein sequence | MRLGDYLVEQ GLLEASRLKA ALAEQSVTGE HLGRILVRNG FIRQDTLVST LRRTNPAMLM
RESTLLPGMD AEVLAETRSM IIAELPDIVY VATLNRTGEV RRKLTPYMGG RDIAFVAASP
QRVDEYLELA QRASSEDGGV LEKMIRRALN ENASDLHIIP RTHSYTVLSR RLGVRELTHE
GALEEYQSLA AQIKDRSRMD MAERRVPQDG GFSIEHNGRV VDMRVATLPT TEGESIVIRL
LDPDRVNPVL DTLGITRIDE FRKAMNRAEG LCLICGPTGS GKTTTLNAAV REMEVLESAI
YSIEDPVEYR IPYVGQVAIN DTVGLDFARG VRAFMRSDPD VVIVGEIRDL ETARNAIKAA
ETGHMVLGTL HTASVHGAIG RLRDIGVESH ELRYLLRGVM AQRLVRTLCK SCGGKGCSLC
RESGYASRTI VSETAYLPDV ESVDKVIQGE RWWPSMAEDV ITKVHAGETD EREVHRVFGA
EIDVASSKAA
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