| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2814 |
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| Symbol | |
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| ID | 8829226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 166978 |
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| End bp | 170268 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Relaxase |
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| Protein accession | YP_003494766 |
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| Protein GI | 290243096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.127016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGTAG TGCAGGAAGC AATTCGACGT TTTCGGGACG CATGGAACGC ATTGGTATCC
GGTGCGTCCG AAGGAGCCGC GGCGGAAGGC CCTACAGAGC AGGCCCGGAG CCGGAACCTT
AACCGCGCCC GTCAGGCGGA TGTGCGTCCC CTGAACCTCG AAGATGACAT TCCGCGCTAT
CCATCGTACA TGGACGGGCT CCCGGCGGTT CCGGTCAAAA CGGTACTCCA GACGCAGATG
GAACTCCTGG CGAAGATTCG TGGCGAGTTC GAGGTGAACA CGGACGAGGA GCGCATGATC
TTCGAGCGTT CGCTGCGCCG GTTTGCCGCG ATCGTTCATC TGCTTCCCGC CTCCGAGAAT
GACCATCACG CCCGCGCCGG CGGTCTGTTC CGGCACGGTC TCGAGGTTGC GCACCATGCC
CTGAAGATCA GTCACGTTCA CGCACCCTTT GCGCGATCCG AGTATGCGGA ACGCCGAAAG
GAGCTGAACA TCCGCTTCCG TTATGCGGTC CTGGTTGCGG CGCTTTGCCA CGACATCGGC
AAGCCAATCA CGGATATTAA CGTCACGGAC GACTCGGGCT CTCGCCGCTG GAATCCCTTT
GGCGCCAGCA TCCCCCAGTG GGCGCAGGAT CTGGGGGTTG AGCGCTACTT CATTCACTGG
AATCGGGGGC GCAGCAAGCG CCACGAGCCC GCGTCACTCA CTCTGTTGAG CGAGATCCTT
GGGACAGGGG GCAAGGCGTT CCTGAGTGAC TACCCCTCCA GCCTGTTCTC CGACACGCTC
GAAGCAGTAG GCGGCGATGC GAGCCCGCTG AATGTGATCG CCAAGGTGGT GAAAACGGCG
GATTCGAGTT CGACGGCCGC GGACAAGCGC CAGACCGTTT CGGACTACGG CGGCACCGGG
ATCCCGGTCG AGCGGTACTA CCTCTCGGCG ATGCGGCGCC TGCTGAGTGA GCGCGGGTGG
AAGCCCAATA AACCCGGGAG TGCCCTCTGG GTCCTGGACG GAATCGCCTT TCTGGTATGG
CCGGCCGCCG GTCAGGATGT CCGCAAGCTG CTCCAGAAAG ATCAGGTGCG GGGGATTCCG
CTGGACAAGG ACACGATTGC CCGCGAAATG CTCGACCGGA ATCTCGCGAC TCCCTTTGTG
GATGACGAGA ACAACACGCA GACGCTTTGG CCGATCCGTC CGGAACCGCT AGCCCACGGC
AAAGGCGCCA AATTGACCCT GTGGGCATTG CGACTGGCTT CGGTCGACAT GTTGACGGAT
GAGCCGATCG CCTCGGTGGG AGGCGTTTAC GGTGGGGATG CGTTGGCCGT GGCAGGCGAG
AGCGACACCC GCGGCACGCG TGAGGATCAC GCAGAAGAAG TGATACCCGA CGCAGGAAAT
GCGGCGGAGC CGGAGATTCC GCAAAGCGGC GCAGCAGAGA TGCAAGTCTC GCCTCCTGCG
AAGCCCGCGC CCACCCCAGA GCAGGCAAAG CGCAAGAAGA AAGTGCCGGG CACCGACACG
CGCTCGGAAA GCCTGTCGCT GGACGACCCG GACGCAGTCC AGCCCAGCGA CCTCCCTGAG
CATGAACCCC CTCGGAAGAT CCCGCAGGAT CGTATCGTCG AGATGGACGA CGAAGCGCGC
CGGGAGTTCT TTGAGAACAA TGCCCTGATG GGGCATATCC TCCAGGCCTT CGCGGAGGAC
CTGAATCGCG CCACGGTGGC ATCGCCGGAT ATCGCCACGG TGGCCTACGA GGTGGAGGGG
AACGAAGGGC GCAAGGTCAA AATTGTCGCC CTGCGCGCGC CGGACTTCTT CGCGGATTGT
ATGCCGGATA TGGAGATCGT CCGAGAGGAA GCCAAGAGCT CGGGTCTGTT CCTGCTCAAT
GCCAATGCGG AACTGCCTTT CAGTGTGGAT GAGGACGCCG CGGAATGGTG GCGCCTGGAC
TATGCCGCGA GCCATGCGGT GTTGCGGCAC GCTTCGAAGT ACGTCGAGAA GATTCGTCGA
AAAAGGGAAA AGGGCGAGCC GGGCGGTCAG GCAGCAAAAC GCCCCAGTCG CGCGCAGGAC
TTGGGGGGGC GCAAGGCGCG CATGCAAGAG CGCAAGGACA AAGACCAGGG AGTCAAGGCC
GAGACGCCAA CAATGCCGGA AGACGCACCC ATGGATACGG ATGCGCCGCC GGTTGTGGAT
GCCGATGAAG CGGCTCCGAT GGTTCCGGAA CCGGAAGGCG GCAGCGGGCC CGCGTCACAG
TCGCATTCGG CACAGCCGGA TGAGAAAACG GACCAAGGCG GCCAGCGGCC GGATGAACCG
GGCCTCGAGA AGCCGGCGAA GCCGGAAAAG TCGGGCGAGC CGCGCAAGCC AGTGGCAGTG
GCGGCCGGGA AAATCACGCC GCTTGCGAGC CGCTCTGGGA GCAAGAGCAC GGGAACCAGG
GCCAAGCCGC GTCCTGAGCG TCTGGTGTTC AGTGGAGGCA AGAAGTCGGC GCCGGATACG
GATTTGAAAC CGGCGGAAAA AGGCCAGGCG AAGACTCGTG CAGAAAATCA CGACGAGAAG
ATCGAGTTCG GCGAGCAAAT CACCGAAGTG GATGGCGTGA AGGCGCGGAT CAAGTGGGCC
AAGCGGTCGG GGCAGTCGGA ATCCGAGCCT GAGAGCGTAC CGCTCGGCGG CAGCGGGAAA
GGAGCCTCGG GACCCGAGAA AGAAGCATCC GAAGACCAAG CCGTGGCGCA ATCCCCGGAA
AAGGAAGATC CGCTAGAGGG GCAATCGGTC TCGGGGTCTG GTGGCACCCC AGACGCGGAT
TCCGAAGCGC CGGCGCCGAA GAAGAAGAGC CGGTCACGCA AGCGGCGCAA GTCGAAGAAG
GTGCCAGCGC CCCCACCGTC CGAACGTCCG CTACGCGACG ACGGTGGCCC GGTCATTCGC
GCCAAGCGGA AGGATGAAGT CAGAAAGGCC GATAACGACA CAGCGCCATC CCCGGAACAA
GGCCCTGGGA CCGAGACGGC CCATCAGCAA GAAGCGGCGG AGACCCCGAA GAGCTCGGAG
CCCCAACCGA TGGATGCGCG GGAGCGCAAG AAGAAGATCC AGGCCGAGGT GATGAGGGTT
CTCAAGGACC GCTGGGAAAG TGGATTGCCG GAAATATCCA ACCAAGAGCT CAGGGAAGTC
GTGGGGGCTG CTGTGAATAT CGAAATTCGC GACCATCATT TGCGGGTTGC ACTGGCAAAA
GTGAAGGCCG AGCGAATTGA GATGGAAGTG AACGGTGAGA AGAAGGAGGG CTACCGAATA
AACGAGGCGG TCGCTGACCG ACTAAGAACA CTGACCAGGG AAGGTGAGTA A
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| Protein sequence | MQVVQEAIRR FRDAWNALVS GASEGAAAEG PTEQARSRNL NRARQADVRP LNLEDDIPRY
PSYMDGLPAV PVKTVLQTQM ELLAKIRGEF EVNTDEERMI FERSLRRFAA IVHLLPASEN
DHHARAGGLF RHGLEVAHHA LKISHVHAPF ARSEYAERRK ELNIRFRYAV LVAALCHDIG
KPITDINVTD DSGSRRWNPF GASIPQWAQD LGVERYFIHW NRGRSKRHEP ASLTLLSEIL
GTGGKAFLSD YPSSLFSDTL EAVGGDASPL NVIAKVVKTA DSSSTAADKR QTVSDYGGTG
IPVERYYLSA MRRLLSERGW KPNKPGSALW VLDGIAFLVW PAAGQDVRKL LQKDQVRGIP
LDKDTIAREM LDRNLATPFV DDENNTQTLW PIRPEPLAHG KGAKLTLWAL RLASVDMLTD
EPIASVGGVY GGDALAVAGE SDTRGTREDH AEEVIPDAGN AAEPEIPQSG AAEMQVSPPA
KPAPTPEQAK RKKKVPGTDT RSESLSLDDP DAVQPSDLPE HEPPRKIPQD RIVEMDDEAR
REFFENNALM GHILQAFAED LNRATVASPD IATVAYEVEG NEGRKVKIVA LRAPDFFADC
MPDMEIVREE AKSSGLFLLN ANAELPFSVD EDAAEWWRLD YAASHAVLRH ASKYVEKIRR
KREKGEPGGQ AAKRPSRAQD LGGRKARMQE RKDKDQGVKA ETPTMPEDAP MDTDAPPVVD
ADEAAPMVPE PEGGSGPASQ SHSAQPDEKT DQGGQRPDEP GLEKPAKPEK SGEPRKPVAV
AAGKITPLAS RSGSKSTGTR AKPRPERLVF SGGKKSAPDT DLKPAEKGQA KTRAENHDEK
IEFGEQITEV DGVKARIKWA KRSGQSESEP ESVPLGGSGK GASGPEKEAS EDQAVAQSPE
KEDPLEGQSV SGSGGTPDAD SEAPAPKKKS RSRKRRKSKK VPAPPPSERP LRDDGGPVIR
AKRKDEVRKA DNDTAPSPEQ GPGTETAHQQ EAAETPKSSE PQPMDARERK KKIQAEVMRV
LKDRWESGLP EISNQELREV VGAAVNIEIR DHHLRVALAK VKAERIEMEV NGEKKEGYRI
NEAVADRLRT LTREGE
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