Gene TK90_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2678 
Symbol 
ID8829090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013930 
Strand
Start bp45130 
End bp46497 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003494632 
Protein GI290242962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.228941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TGATGAAGTC TGATTCAGTG GATATCGACC TCAATGAGGT CGAAGGCCTG 
GAGTTGTGCG ACCCGGATTG TGGCCCGATG GGTTATGACG GGCCTGTGAT TCGCCGGTTG
TCGGAAAACC GGATCGCAGT CGGTCAACTC GTCCGGGACG ATGATCCCGC GATCTTCCAA
ATGTTGGAAG ACGACAATAT GGCGAACGTC GTCATTGCAG AAAACGCATC GACCGCCGAA
CTGGAAAGAT TGCACGCAGC ACTGGGGACC ACCGTCCACA ACGGCGTGCT CGATGAACCT
GTGTTCTCCG AGATGCTGGA TCAAACCAAC CGCCACGGAC GGGCCTTGCT CGAGTCCTGG
GTTCAGGACC TAGCAAAACG CACGCTGGAC CCCGTGTTTC TTCAGGACGA AGACCAGGTG
CAACGTCTCA AGGCAGTGGA TCAGGATATG TTGCTGTCCC AGGAGATGAA TGACCCGGAC
CTGCGGGACT GGGCCATTCG GAACGCCCCG TCGAGCGTGA CGATATCCGA TGGATGGATC
CGGTCGCGCA TTCGGCGGGG TATTCGCAAC CGGGATGAAA GCCTGGCGGA TCTGGACTGT
GTGAAGCGTC ACTGCAACAC CGCCGATCTT GCGAAAGAGC AGGCGAAAAC CCTGCTCAAC
GACGCCCCTG AAGACCTCGA TGAAGTCAAC GTGGTCGAAG GCGCGGTGGA TCAGTGGTGG
GCGGATCTCG TGACGGAAGG CGGATTCGGT GACAAGTATG CCGTTCCGTT TAAACATGCG
TACCACTCCT CGGCCGGTCC GATATCGCTG TCGGTCACCG GAACGTGGCC CGATTTCGGG
GAACGGTTGG GGGGTGTCTG CCTGCTGGAA TCCGACCAGG TAGAGATGTG CCGCAAAGAC
GCGGACCTGT ACGCCTTCAC ACGGTTTCGT CACGACAGGA CCTGGGGTAC GGCCGACGTC
GAGCTCGACC CGGCGTTTGC CGAGGCCCTG GGCGTCGGCC GCTATATCCA GTTCAGTGAT
CTGAGAAAGG CTGAATCCAC GATCCGCGAG TGGATGGATC AGGCCTGGAG GTCCGGTTCG
GGCGCCTTCT GCGTCCTGCC CTCCGCGCGT GAACGCGGTT TTATCGAGGC CGCTGAAACC
CTCGCCTCGA TCATCGTTGA TGAAATCGAG GATGCGATGA ACGGCAATGT GTTCGTCAGC
ATCATCGATA TCCTCGAGTA CGACCCGGTC GAAGGTGTCT GGCATGTCCT GGAGGATCAA
CAGCACACCT GTGGCGGATT CATCGGAGAT GCCTGGGCCC GCGACGGGCT TGCGGACATG
CTCCCCCGTG CGCAGGAAGA ACCGGAACCC GCCGCACTGG CGGCGTAA
 
Protein sequence
MKKLMKSDSV DIDLNEVEGL ELCDPDCGPM GYDGPVIRRL SENRIAVGQL VRDDDPAIFQ 
MLEDDNMANV VIAENASTAE LERLHAALGT TVHNGVLDEP VFSEMLDQTN RHGRALLESW
VQDLAKRTLD PVFLQDEDQV QRLKAVDQDM LLSQEMNDPD LRDWAIRNAP SSVTISDGWI
RSRIRRGIRN RDESLADLDC VKRHCNTADL AKEQAKTLLN DAPEDLDEVN VVEGAVDQWW
ADLVTEGGFG DKYAVPFKHA YHSSAGPISL SVTGTWPDFG ERLGGVCLLE SDQVEMCRKD
ADLYAFTRFR HDRTWGTADV ELDPAFAEAL GVGRYIQFSD LRKAESTIRE WMDQAWRSGS
GAFCVLPSAR ERGFIEAAET LASIIVDEIE DAMNGNVFVS IIDILEYDPV EGVWHVLEDQ
QHTCGGFIGD AWARDGLADM LPRAQEEPEP AALAA