Gene TK90_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2677 
Symbol 
ID8829089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013930 
Strand
Start bp44228 
End bp44899 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003494631 
Protein GI290242961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.960016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.33049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACT TACCGCACTC CCGCCTGACG GGGGAGTCGC CGGAGGCCGT CGGTCGCCTG 
CTCGACCCCA AGCGGGATCG GGAAGCGATT GACGAGCTGA TGGAGAAGGA CTGGCAAACG
GACTGGGCCC TGGCCGGGGC CGTGTCACTG GTCTGGCATC AGGATAACGC CGTCTCGGTG
GCCGGAGTCG GCCGCTACGC CCTTCAGGAC TGCCTGGACG CCCATGATCG CGGGGATTCG
GGTCGGGGGC ACCTGATTTT CGTGCCCCGG CACGAAGGGA TCCGATCCGC CGTTCTCGAA
AACGTGATGC GGTTCGGTAT CGAGCCCTGC GAAGGCGGTG AGTACCGCCG TTTCTCGGAC
TGGGTCTGTG AAGCCCTGGA ACCCCAACTT CGGGACCAGG GCGCCCTTTG GACCTGGCCC
GCCTGGCCGG TCAAGGGCGG TCACGATGAC AGCCGCGGTT ACATCATGCT GACCCGCCCG
GGGCGCGAGC GCGTCGCTGA CATCCTCATC GAGGTCGGCA GCCCTCGAAA GCTGACCCGA
GCCATCTGGT TCGAACTGGC CGCCGCCAAC CTGACGGACC GACGAGTCCG AAGTGAACTT
CGGTCCGCCC GGGCCCCGTT GGGCGCCTGG CTGGGCGTAC CGGATGGTGT CGAGCGACGA
TCCCTGTTCT GA
 
Protein sequence
MEHLPHSRLT GESPEAVGRL LDPKRDREAI DELMEKDWQT DWALAGAVSL VWHQDNAVSV 
AGVGRYALQD CLDAHDRGDS GRGHLIFVPR HEGIRSAVLE NVMRFGIEPC EGGEYRRFSD
WVCEALEPQL RDQGALWTWP AWPVKGGHDD SRGYIMLTRP GRERVADILI EVGSPRKLTR
AIWFELAAAN LTDRRVRSEL RSARAPLGAW LGVPDGVERR SLF