Gene TK90_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2550 
Symbol 
ID8808334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2686922 
End bp2688040 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003461775 
Protein GI289209709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0136518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTG ACACCGCACT GCGCCTGGCC CTGGCACGGC CGGAGAGCAT GGCCGAGCGC 
ACGGCGGCCG AATGGGCCCC GCTGCTGGCG GCCGCGCGCG AGAGCGCACT GCCGGGTACG
CTCTGGCACC TCGCGGACGA CGCGGGCCTG GCGGACGGCC TGCCGGAACC GGTGGCCAGC
CAACTCTGGG GCGCCGCCCT GATCGCCGAG CATCGCTCGC AGGCCCTGGT CTGGGAACTG
CACCGCCTGG AAAACGGGCT GCTCTCGCGG ATGAGTCCGG GTGTCGCGCT GAAAGGGGCG
GCCTACCTGG CCGCCGGGCT GCCGAATGCG CGTGGACGGC TGGCCAACGA CATCGACCTG
CTCTTTCCCC ACAACGAGGT GGAACGCGCC GAGAAGCTCC TGTTCTTCGA AGGCTGGTCG
GGCACGCACC ACAATATCTA CGACCAGCGC TACTACCGCG AGTGGATGCA CGAACTGCCG
CCACTGGTGC ACCAGAACCG CGGCACCACG CTGGACCTGC ACCACAACAT CCTGCCGGAG
ACCTTTCGCG GCCATCTCGA TGCCGCGCGC CTGCGGCAGC AAAGCCAGGC GCTCCCGGAA
CCCTTCCGCT TCCGGATCCT GTGCCCGGCG CACCTGGTAC TCCACGCAAT CGTGCACCTG
TTTTCGGAGA CGGAATGGGA CCGCGGCCTG CGCGACCTCT ACGACATCCA TGTGCTGCTC
GGCCACTTCG GTGCCCGTGA CGGCGATGCC TTCTGGGAGC ATTTCGTCGT GGAGGCCGAG
GCCCTGAACA TCGCCTGGAT GGCGGAGCGC GCGTTGTGGA CCGCGAACCG GCTACTGCTG
ACCGAGGTCC CGCCCGAATC CGTCAAACGG CTGGCCCGGG CACGCGCGGG CATTGCCCTG
CGGGGCCCCG GCCGCTGGGC ATTCGTGCAC GGGCTGCATA CGCGTGCCGG CTCGATCACC
CCCCGCCGCG ATGCGCTCGC ACGGGGCATG CTGTTTCTGC GCGGGCACTG GCTCAAGATG
CCGGCCGGCC TGCTGGCGCG ACACCTGTTC CACAAGGCCT TCCTCGCCGA GAAACCGGAG
ACGGCCACGG CCCAGCCGCA GCCGGAACAG CACGGTTAG
 
Protein sequence
MDADTALRLA LARPESMAER TAAEWAPLLA AARESALPGT LWHLADDAGL ADGLPEPVAS 
QLWGAALIAE HRSQALVWEL HRLENGLLSR MSPGVALKGA AYLAAGLPNA RGRLANDIDL
LFPHNEVERA EKLLFFEGWS GTHHNIYDQR YYREWMHELP PLVHQNRGTT LDLHHNILPE
TFRGHLDAAR LRQQSQALPE PFRFRILCPA HLVLHAIVHL FSETEWDRGL RDLYDIHVLL
GHFGARDGDA FWEHFVVEAE ALNIAWMAER ALWTANRLLL TEVPPESVKR LARARAGIAL
RGPGRWAFVH GLHTRAGSIT PRRDALARGM LFLRGHWLKM PAGLLARHLF HKAFLAEKPE
TATAQPQPEQ HG