Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2541 |
Symbol | |
ID | 8808325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2677266 |
End bp | 2678222 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_003461766 |
Protein GI | 289209700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0393046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0973746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCGCA TGCTGCGAGT ACCGTTGTCC ATGCTGTCGC CGCAAGGCCG GCGCGCGCGC CTGACGATCC TCGCCTATCA CCGCGTGCTG ACGGACCCCG ACCCGCTGCG ACCGGAAGAC CCGGTGGCCG AGACCTTTCG CTGGCAGATG CGCCTGCTGG CGCGGGAGAT GAACCCGCTG CCGCTGGACG AGGCCATCGA GCGCCTGCAG GAAGGCCGGC TCCCCGCCCG GGCCGTTGCG GTCACCTTCG ACGACGGTTA TGCCGACAAC GCGGAGGTCG CGTTGCCGAT CCTGCGCGAG GAAGGGGTGC CGGCAACGTT CTTTGTCGCC ACCGGCTATC TGAATGGCGG CTGCATGTTC AACGACATGC TGATCGAAAC GGTTCGCCAG ATTCCCTCCA TGGCAGTGGA CCTGACCCCG GAGGGACTGG GCACGCGTTC ATTGGACTCC GTGGCGCAGC GCCGCTCCAC GATCCACGCC CTGATCGGGG CCCTCAAGTA TCGGCCGCTG ACCGAACGCA GCCGTCGCGC CGAGGCGCTG GGTGCGCGTT TCGGCGTCAT GCCCCCCGGC GATCTGATGA TGACCGATGC CCAGGTTCGT GAGCTGGCCG ATGCCGGCAT GGGAATCGGC GGGCACACCG TCCTGCACCC GATCCTGGCC GAGACCGATG CCGCGACCGC ACAGCAGGAG ATCGCGGAGG GCAAGGCCGA ACTCGAGGCC CTGGTGGGAC GTCCCGTACG GCTGTTTGCC TACCCCAACG GGCGCCCCGG CAAGGACTAT GCGCCGGAGC ATGTCGAGAT GGTGCGTGCC AGTGGGTTCG AGGCTGCGGT ATCCACGATG GCGGGTGCCG CTGGCCGCGA TACGGATCCG CTGCAGCTGC CGCGCTTTAC CCCCTGGGAC CGAACGCCTC TGCGCTTTGG CCTGCGGCTG GCGCGCAATC TGGCTTCAGC CCACTGA
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Protein sequence | MERMLRVPLS MLSPQGRRAR LTILAYHRVL TDPDPLRPED PVAETFRWQM RLLAREMNPL PLDEAIERLQ EGRLPARAVA VTFDDGYADN AEVALPILRE EGVPATFFVA TGYLNGGCMF NDMLIETVRQ IPSMAVDLTP EGLGTRSLDS VAQRRSTIHA LIGALKYRPL TERSRRAEAL GARFGVMPPG DLMMTDAQVR ELADAGMGIG GHTVLHPILA ETDAATAQQE IAEGKAELEA LVGRPVRLFA YPNGRPGKDY APEHVEMVRA SGFEAAVSTM AGAAGRDTDP LQLPRFTPWD RTPLRFGLRL ARNLASAH
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