Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2505 |
Symbol | |
ID | 8808289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2632667 |
End bp | 2633260 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | type IV pilus assembly PilZ |
Protein accession | YP_003461731 |
Protein GI | 289209665 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACG ATCTGAGCCA GAGAAGCCTC GCGCAGAACC TGGCGGAGTT TTGGCATCCC GCCATGCTCA AGCGGAACTG GAGCGAGCGT CTCGCGCTGA TGAACGACAT CTACCGACAG CTCCACCGGT TCAGCGCTAG TGACGAGGAG TACGAGTCCT GGGCCGGACA GCTGGTGGAG GCCGTAATCG ACCGGCTCGG GGAACCCCCG GTCGCGGATC CGGATCAGGC CGATCTCTAC GCCTGCTCGC CGAACCCACG GCACTGGTCG GCCGCATTCG CCTGGCGCTA CGGGCGCATG ACACCCGGCC GGCCCGAGCA GCGGTGCTGG CCGAGGTATG CGGTCAATCT GCTGACCGAG ATCGGCATCC GAAAGGAGTG GCGCAAGTGC CGCCTGATGG ATCTTTCGCG GGGTGGCGCG CGGATTGTGC TGGTCGGGCA GTACCCGTAC CTGCCGCCTG AGACCACCTT GCAGCTGGTG CTCCCGACCG CCGGGACCTT CGATGCCGTT GTGGTTTCCG ATCGCCGGGT GGGGCTGGGC CTGCGCTTTC TCAGGCGCAA CCGCCCGGGT CACCGCATCG ACACCACGGC CTGA
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Protein sequence | MDDDLSQRSL AQNLAEFWHP AMLKRNWSER LALMNDIYRQ LHRFSASDEE YESWAGQLVE AVIDRLGEPP VADPDQADLY ACSPNPRHWS AAFAWRYGRM TPGRPEQRCW PRYAVNLLTE IGIRKEWRKC RLMDLSRGGA RIVLVGQYPY LPPETTLQLV LPTAGTFDAV VVSDRRVGLG LRFLRRNRPG HRIDTTA
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