| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2494 |
|---|
| Symbol | |
|---|
| ID | 8808278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2618731 |
|---|
| End bp | 2619378 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF218 |
|---|
| Protein accession | YP_003461720 |
|---|
| Protein GI | 289209654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTTGG TAATCGGCCT TCTATTGAGC TATTCCTTAT CTACTCCTGT ATTTAGTTAC
GCCCTCATGA AGCCCTTGCA GGAGGGGTTT GCGCCGCCGG ACGACAACCA GCTGGCGGAC
GCACAAGCGA TTGTGGTGCT GGGGGCCGGG TATCGCAGTG GAGCCGAAGA GTTCTCGGGC
GAGACCGTCC ACGACCTGGC ACTGGTGCGC CTGCGTTACG CGGCGTACCT GCACCACCGC
ACCGGGCTGC CCGTGATGGT TTCGGGCGGG GGCCCCGAGG AGCGAGTTCC AGAAGCCGAC
TACATGGCAG AGGTACTGAA GGAATATGGC GTCCACCCGA TCCTGCGGGA ACCCAATGCG
CGCGACACCT GGGGCAATGC CCGGCACTCC GCCGAGCAGC TGCATGCAGA GGGGATCGAG
CGCGTGGCAC TCGTGAGCCA TGCCCATCAC ATGCCGCGCG CCACTTGGTC ATTCGAGCGC
GCGGGCCTGG AGATTATCCC GGCCCCGACC GGTGCCTATG TGCCGCGAGA TAACGGCTGG
TCCCTGGAGG GCTTTCGCCC GCAGGCCAGT GCGGTCTGGG CCAGCTGGCT CGCACTGCAC
GAGTACTGGG GCATGGCCTG GTATCGCTGG CAATACGGGC CGGAATAG
|
|---|
| Protein sequence | MLLVIGLLLS YSLSTPVFSY ALMKPLQEGF APPDDNQLAD AQAIVVLGAG YRSGAEEFSG
ETVHDLALVR LRYAAYLHHR TGLPVMVSGG GPEERVPEAD YMAEVLKEYG VHPILREPNA
RDTWGNARHS AEQLHAEGIE RVALVSHAHH MPRATWSFER AGLEIIPAPT GAYVPRDNGW
SLEGFRPQAS AVWASWLALH EYWGMAWYRW QYGPE
|
|---|
| |