| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2373 |
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| Symbol | |
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| ID | 8808154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2491457 |
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| End bp | 2493517 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003461599 |
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| Protein GI | 289209533 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.399267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC CCAGGATACT CACCACGGGT CTGACCGGTC TGGTCATGGC CTTCGCCGCC
GGGGCCCCGG CGGCGAACCC GGCCCCGACC GGAATGGTCT TCGAACGCAG CCTGTTCCTG
CATGCCGAAC GTGCCCTGAG CCGTGGCGAC ATGGTGGCCT ACCGCAATGC CCGCAGTACG
CTCGAGGGCT ATCCGCTGAC GCCCTATCTG GATCATCGCG AACTGGCGCG CGACCTGGGG
CGCGCGGACC CCGATGCGGT GCGGGCCTTT ATCGAGGAGC ACGACGACAC CCCGCTGGCC
GGCCAGTTGC GCAGCAACTA CCTCTCCTAT CTGGCCCGTG AGGAGGCCTG GTCGCGCTAT
CTCGACTTTG CCGACGACGG CCGCGACCTC TCCGTGACAC AGGACTGTCA GCGGCGCAAG
GCGCTGATCG AGACCGGCAA TACCTCCGCG GCGATCGAGG ACATGGACTC CATCTGGCTG
CACGGCCAGT CCCGTCCCAG TGTCTGCGAT CCGGCGCTCA AGGCCTGGCG CGATGCCGGC
GGGCTGACCG AAGAGCTGGC CTGGGACCGT TTCGCCCTGG CGATGCAGGC GCGCCAGACC
GGGCTCGCGA GCTACCTGCG CCGCTATCTG GCGAGCTCCG ATCGCGACTG GGCGGAGCGC
TGGCTGGAGC TCGAATCGCG ACCGTCGCGG GTGGTCGAGG TGGACTTCCG CGCGGATGAG
CATCGCTCCG CCGAGGCGAT GCTGGAACAG GCGTTCAAGC GCTGGATTCC GCAGGACCTG
GATGCCGCTT TGAAGGGCTG GGAGGAACGG AGCGAGCGCT TGGGCTTGTC GACGGAGACC
GCTCGCGAGA TCGAGCACGC GCTTGCGTTG CGTCTGGCGC TGCGCTATCG GGACGAAACA
CTGGCCGTCA TGGACGAGCT GGACGCGGAG GTGTTCGACG ATCAGTTGCG CCAGTGGCAG
GTGCGGGCTG CTCTGCACCA GCGTGACTGG GAGACCGTCA AAAGCGCGAT TCGTGCCATG
AGCCGCGACG CCCGTGACGA GACTGCCTGG CAGTACTGGT ATGCCCGTGC ACTGGAGCAG
CTGGGCGATG CCGACGAAGC GCGCTTCTTC TACGAACGGG CGGCGCGTGA GCGCAACTTC
CACGGATTCC TGGCGGCCGA CCGTCTGGGG CAGCCCTACC GCATTGCGCA CCAGCCCCTG
CAACTGGGCC ATGGCGCGCG CGAATCGATC ATGGAGCGGC CGTCCATGCA GCGCATGCGC
GAGCTGGTGG CGCTGGACCG CTACGCTGAG GCACGCCGCG AATGGACCCG CACCGTCGCC
AGCATGGAGC CGCCCGAGCT CGAGGCCGCG GCGGCCGAGT TCGCCGACTG GAACTGGTAC
GACCGCGCGA TCTTCACCAT CGCGCGGGCC CGCAACTGGG ACGACATCGA GCTGCGCTTC
CCGCTGGCCT TCGATTCCGT AATCGTCCCG GGCGCGGAAA AACAGGGCAT CGACCCGGCC
TGGGCGATGG CGATTGCCCG CCAGGAGAGC GCCTTTCTGC ATGACGTGCG CTCCGGGGCC
GGGGCGCTGG GGGTGATGCA GATCATGCCG GCGACCGGGC GCTCGATCGC TTCCAGCGCC
GGGGTCCGGG TCAACTCCGA CTGGGACATC CTCGACCCGG CGACCAACGC GACCCTGGGC
ACGTACTACC TGCGGCGCAA CCTGGACCGC TTTGGCGGGC ACAGCCTGCT GTCCACGGCG
GCCTACAATG CCGGGGCCCA TCGCGTGCGC TCCTGGCTGC CGGACGACGG CGAGATGGAC
GCGGACATCT GGGCCGAGCT GATCCCGTTC TCGGAGACGC GTGACTACGT GCGCCGGGTG
TATGCCTACC AGATCGTCTA TGCGGTGCGC TTGGGGCAGG ACCCGCCGTC GCTGTCGCAG
CTGCTGTTCC CGGTGACGCC GGAATCCAGG CTCGCGGCGA GCCGCGAGGA TCACCTCCGG
GCGCTACGCA ACATGCGCGA GGACCTCGCG CTCGGTCGCG CCTTCTGCGA CGCACCCGGC
TACACCGAGA ACGCCTGCTG A
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| Protein sequence | MRLPRILTTG LTGLVMAFAA GAPAANPAPT GMVFERSLFL HAERALSRGD MVAYRNARST
LEGYPLTPYL DHRELARDLG RADPDAVRAF IEEHDDTPLA GQLRSNYLSY LAREEAWSRY
LDFADDGRDL SVTQDCQRRK ALIETGNTSA AIEDMDSIWL HGQSRPSVCD PALKAWRDAG
GLTEELAWDR FALAMQARQT GLASYLRRYL ASSDRDWAER WLELESRPSR VVEVDFRADE
HRSAEAMLEQ AFKRWIPQDL DAALKGWEER SERLGLSTET AREIEHALAL RLALRYRDET
LAVMDELDAE VFDDQLRQWQ VRAALHQRDW ETVKSAIRAM SRDARDETAW QYWYARALEQ
LGDADEARFF YERAARERNF HGFLAADRLG QPYRIAHQPL QLGHGARESI MERPSMQRMR
ELVALDRYAE ARREWTRTVA SMEPPELEAA AAEFADWNWY DRAIFTIARA RNWDDIELRF
PLAFDSVIVP GAEKQGIDPA WAMAIARQES AFLHDVRSGA GALGVMQIMP ATGRSIASSA
GVRVNSDWDI LDPATNATLG TYYLRRNLDR FGGHSLLSTA AYNAGAHRVR SWLPDDGEMD
ADIWAELIPF SETRDYVRRV YAYQIVYAVR LGQDPPSLSQ LLFPVTPESR LAASREDHLR
ALRNMREDLA LGRAFCDAPG YTENAC
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