| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2131 |
|---|
| Symbol | |
|---|
| ID | 8807906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2250403 |
|---|
| End bp | 2250960 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Rare lipoprotein B |
|---|
| Protein accession | YP_003461357 |
|---|
| Protein GI | 289209291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.1085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG TGCTACGCGC AGTGCTGGTC GTATGGCTGG CGGTTGCCGT GGCCGCCTGC
GGCTTCCAGC TGCGCGGCAG CATGGACTGG CCGGAGGCCC TGGCCCCGGT GCAGATCACT
GGCGTGAATC CGCGTGATTC CCTGTACCGC GAGCTGGCGG TGGCCTTCGG CTCGGCCGGG
GTCGAGGTGG TCGATCAGCG TCCCGAGGGG CAGGGGGCCA CCCTGGACGT GCGTTCCGTG
CGCGACCGGC GGCGCACGCT GTCGGTGACC GACGCCGCAC GGGTCGCGGA GTACGAACTG
ATCCGGTCGG TGGACGTGCG CCTGCGCCCG GTGGACGGAG AGGCCGTGGA TCTGGGCACG
TTGCACGCGA GTCGGATCTA CCTGTTCGAC GGCTCGGCGG TGCTCAGCCG TTCCGAGCGC
GAGGAGACCC TGCGCGAGGC GATGAACCGG GATATCGTCA GCCAGCTGCA GCGTCGTATT
CAGGCGGTGA TCGGAGCCGA CGGGCAGTTG CGCACGGATG TCGAGTTCGA GGATGACCAG
CCGTCAAGGG AACACTGA
|
|---|
| Protein sequence | MSAVLRAVLV VWLAVAVAAC GFQLRGSMDW PEALAPVQIT GVNPRDSLYR ELAVAFGSAG
VEVVDQRPEG QGATLDVRSV RDRRRTLSVT DAARVAEYEL IRSVDVRLRP VDGEAVDLGT
LHASRIYLFD GSAVLSRSER EETLREAMNR DIVSQLQRRI QAVIGADGQL RTDVEFEDDQ
PSREH
|
|---|
| |