| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1994 |
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| Symbol | |
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| ID | 8807768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2120010 |
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| End bp | 2121746 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003461221 |
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| Protein GI | 289209155 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.213065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGGC TTTCGGAGTT TGACCGACCC TGGCGTCCCG AATCCTGGCT GGGGGTGACC
GGCGCCTGGC GCCTGACCGG CGTGGGACTG GTCCTGATCC TGATGGCCGG CGTCACACTA
CTGGTCTATC AGACCGGCGG CACCAGCACC GCCTATCTCA ACTTCATCCT GATCCCGGTA
CTGCTGGGCG CCGCCCTGAT GGGCCTGTGG GGCGGGCTGG CCTTCGGCCT GCTCGCCGGG
CTTCTGCTGG GGCCGTTCAT GCCCCTGAAC GTGGACGAGG GGATCGCCCA GCCGACCCTC
AACTGGGTGA CCCGTGCCGG GATCTATCTG GTGCTGGGCG GGTTCAGCGG CTGGCTGTTC
TCCCAACTGC GCCAGCACGC GACGCGGCTG CTCGATCAGG CCTACCACAA CCCCGTCACC
GGCCTGCCCA ACCGCGAGTC ACTGGAACAG CATGTCCGAC AACTGATGAC CCAGGCGGAG
GGCTCGGAAC AGCCCGCAAC CCGGGTGTTC GTGATCAGCC TGCAAATGGA AAACTATGCG
GACACGATCA GCGCCCTGGG CTTCGCCGCG GAGAGACCCC TGCTGACGGG GATTGCCGAA
CGACTGCAGG CCGTCGCCGG GGGCCCGGAC ACCCTCGTCT ACCATATCCA CGACGACCAC
TTCGCCTTGC TGCTGCCTCA CCGCAGCCGC CAGGAGTGCC TGGCCACTAC ACAGGAGGCT
GTGGAAGAGT TGCAGGCGCC ATTCGAGGTG CTCGGGCTGC CGGTTTACGT CGGGGCTCAC
GCCGGGGTGT CCTCGTTTCC GTTCCACGAA CAGGACGACC CGCAAAGCCT GCTGACCAAG
GCCTGGATGG CGATGCACGA GGCCAGTCAG TCGGGCCGGC GCTACCGCAC CTACGACCGG
CGCAGCAACG ACGCCGGCCG CCAGACCGTG GAGCTGCTGG GCGAGCTGCA AAGCGCCCTG
GAGGGCGACC AAATCCAGTT GCACTACCAG CCCAAGGTGA CCCTGCAGCG TGGCGAACTG
TGCGGCTTCG AGGCCCTGTT GCGCTGGCAA CACCCGCACC GGGGACAGGT ACCGCCGGAT
CGGTTCATTG CACAAGCCGA GCGAACGGGG CTCATTCATG CCCTGACACT CAAGGTACTG
GACCTGGCGA TCGCCGACCT CCTGGTGCTG CGCGAACAAG GCATCCAGGC CCCGGTCAGC
ATCAATGTCT CGGCGCGCAA TTTCCTCGAT CCCGACTTTG CACAAACCAT TATCGAACGT
ATCGAAGCCG CCGGCCTCCC GGCCTGCTCA CTGGAGCTCG AATTCACCGA AACGGCCCTG
ATGGCCGATC CCGATCAAGT CATCGAGGCC CTGCGGCGTC TGACGGAGCG CGGGCTCGCG
CTCTCCATCG ACGACTTCGG CACTGGATAC TCCTCTCTTG CCTACCTGAG GCGGCTCCCG
ATCACGACCC TCAAGGTCGA TCAAACCTTC GTGTCCCACA TGGCCACGCA GCGAGTGGAC
GAACAGATCA CCCGCGCGGC CGTGGGCCTC GCGCACGACC TTGGCCTGAA GGTGGTCGCC
GAAGGCGCGG AAGACAGCCA GACCCTCGAC ATGCTGCGCG AACTGTGCTG CGACGCCGTC
CAGGGCTTCG GGGTCGCCCG CCCCATGCCC TTCAGCGAGA CATTGCAATG GGCACGCCAT
CAGACGGTCG AGCCCTCGTT GCGACGCGAG TGCGCACTGG AGCAGGACGC TCCGTGA
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| Protein sequence | MERLSEFDRP WRPESWLGVT GAWRLTGVGL VLILMAGVTL LVYQTGGTST AYLNFILIPV
LLGAALMGLW GGLAFGLLAG LLLGPFMPLN VDEGIAQPTL NWVTRAGIYL VLGGFSGWLF
SQLRQHATRL LDQAYHNPVT GLPNRESLEQ HVRQLMTQAE GSEQPATRVF VISLQMENYA
DTISALGFAA ERPLLTGIAE RLQAVAGGPD TLVYHIHDDH FALLLPHRSR QECLATTQEA
VEELQAPFEV LGLPVYVGAH AGVSSFPFHE QDDPQSLLTK AWMAMHEASQ SGRRYRTYDR
RSNDAGRQTV ELLGELQSAL EGDQIQLHYQ PKVTLQRGEL CGFEALLRWQ HPHRGQVPPD
RFIAQAERTG LIHALTLKVL DLAIADLLVL REQGIQAPVS INVSARNFLD PDFAQTIIER
IEAAGLPACS LELEFTETAL MADPDQVIEA LRRLTERGLA LSIDDFGTGY SSLAYLRRLP
ITTLKVDQTF VSHMATQRVD EQITRAAVGL AHDLGLKVVA EGAEDSQTLD MLRELCCDAV
QGFGVARPMP FSETLQWARH QTVEPSLRRE CALEQDAP
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