Gene TK90_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1958 
Symbol 
ID8807732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2080740 
End bp2081468 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003461185 
Protein GI289209119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.758045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG CTGTTGAACT GCCCGAACAC TTTATGCCGG CCCGGATCGA GGTCATCGAA 
CAGGTCACAC CGCTGATCAA GGTCTTTACC CTGTCGGCTG ACCCGGCGCG CTTTTCCAGC
AAGGCCGGGC AGTGGCTGGA CCTGGTGATC CCGCAGCCCG CTGGCAAGCC CTTTGTCGGG
GGGTATTCGG TGGTCTCCGC GCCGCGTGAT GACGGGCGGC TGCAGCTCGC GATCAAGTAT
GCCGATCACC ATCACGCCAC GCATTACCTG CACACCACCG CGCGCGAGGG GGATACGGTC
TATATCACCC CCGGCCAGGG CAGCTTCTTC TTCGAGCCGG GTATGGCACG GAACGTCGTG
CTGCTGGGCG CGGGGATTGG GGTCACGCCG CTGTTCAGCA TCCTGCGCGC GGTCAATGAC
GGCATGCCGG ACGTCTACGC CCATCTTGTC TACAGCGTCG CCCACCAGGA CGAGATGCTG
TTCCCCGACG AACTGGCGCA CCTGGCCAAG GCCGAGAACA TCGACGTAAC GCTGACCGTG
ACGCGCGAGG CCGAGGACTG GCTGGGCCAC ACCGGGCGCA TCAGCCACGA GCTCCTCGAG
TCCCTGAACC TGCCGCGCGA CGCCCTGTTC TACTTCTGTG GTTCGCGCGA GTTCATCGAG
GACATGGCCA CGCTGCTGGC CGAGTGGGGA ATCCCCGAGG CCCAGCTCAA GTACGAGAAG
TGGTGGTAG
 
Protein sequence
MTHAVELPEH FMPARIEVIE QVTPLIKVFT LSADPARFSS KAGQWLDLVI PQPAGKPFVG 
GYSVVSAPRD DGRLQLAIKY ADHHHATHYL HTTAREGDTV YITPGQGSFF FEPGMARNVV
LLGAGIGVTP LFSILRAVND GMPDVYAHLV YSVAHQDEML FPDELAHLAK AENIDVTLTV
TREAEDWLGH TGRISHELLE SLNLPRDALF YFCGSREFIE DMATLLAEWG IPEAQLKYEK
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