| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1938 |
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| Symbol | |
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| ID | 8807711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2059408 |
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| End bp | 2061897 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | ribonuclease R |
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| Protein accession | YP_003461165 |
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| Protein GI | 289209099 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.751615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGAA AAAGAAGCAA GGCGCCGGCC GATCCCAATT TCGAGCGCGA GGCGCAGAAG
TACGACAATC CCATCCCCAG CCGCGAGTTC ATCCTCGGGC TCCTGCAGGA AGCCGACAAC
CCCCTGTCCT ATGACGAGAT TGCCGAGCGT CTGGAAATTT CCGACGACGA CCGTCTCGAG
GCCCTGCGCC GTCGCCTGAA GGCGATGGAG CGCGACGGCC AGGCGCTGTG CAACCGGCGC
GGCGCCTATC TGCCGGTCAA CCAGGAAGAC CTGATCCGCG GACGCGTCAT TGGGCACCCG
GACGGCTTCG GCTTTCTGGT GCCGGACGAA CAGGACGACG ATCTGTTCCT CTCGCCGCGC
CAGATGCGTG GTGTGTTCCA TGGCGACCGC GTGCTGGCGC GGGTCATGGG CGTGGATCGT
CGCGGTCGCC GCGAGGGCGG CATCGTCGAG GTCCTCGAGC ACAACACGAC CCAGGTGGTC
GGGCGCCTGC GCATCGAGGA CGGGGTGGGC ATCCTGACCC CGGACAACAA GCGCATCACC
CACGACATCC TGGTGCCGCC CGATGGCCTG GGCGAGTCCG GGGACGACCA GATCGTGGTC
GTGCGTATCC GCGAGTCCGC GTCGCGCACG GCACGCCTGC GCGGGGACGT GATCGAGGTG
CTGGGTGAGC ACATGGCGCC CGGCATGGAG ATCGATATCG CGATTCGTGC CCATGGTCTG
CCGCACGAGT GGCCGGAGGA GGTCGCTGCT GCAGCCGACG AGCTGGGCGC CGAGGTCAGC
GAGAAGGCCA AGAAGGGCCG CCTGGACCTG CGCGCACAGC CGTTTGTGAC CATCGATGGC
GACGACGCGC GGGACTTTGA TGACGCGCTG TATTGCGAGC GCGACGGCAA GGGCTGGCGT
CTGTGGGTCG CCATTGCGGA CGTGTCGCAC TACGTCGAGC GGGAGGCGGC GCTGGACCGC
GAGGCACGTA CGCGCGGGAC CTCGGTGTAC TTCCCGAACA ACGTGATCCC GATGCTGCCG
GAGGTGCTGT CCAACGGGCT GTGCTCGCTG AACCCGAACG TGGACCGGCT GAGTATGGTC
TGCGAGATGG AGATCGGCGC GCGTGGCGCA CTGAAGAGCT ACCGCTTCCA CGAGGGCCTG
ATCCGCTCGC ATGCGCGCCT GATCTACGAG GACGTTGCGG CGATGCTCGA TGGCGATGCG
CCGCTGCGCG AGCAGAATGA GCATGTGATG CCCCACCTGG AGGTCCTGCA CGAGGTCTTC
AAGGCGCTGC ATGCCGCGCG CAACCGTCGC GGCGCGATCG ACTTTGATAC CACCGAGACG
AAGATCATCT TTGGCGAGGA TCGGAAGATC GAAAAGATCG TGCCGACCGA GCGCAACGAC
GCGCATCGCA TGGTCGAGGA ATGCATGATC ATGGCCAACG TGGCGGCCGC GCGCTTCCTC
AAGAAGCACA AGGTGCCGGC GCTTTACCGT ATCCATGACC AGCCGCCGAC CGACAAGGTT
GACGACCTGC GCGACTTCCT CAATGGGGTG GGCCTGACGC TCGGCGGCGG CAGTGAACCG
AGCCCCCGTG ACTACACCGA GGTGCTGAAG GCGGCGAAAA AGCGCCCCGA CCAGCAGCTG
ATTCAGACCG TGCTGCTGCG CTCCCTGAGC CAGGCGGTGT ATGCCCCCGA ACTGGACGGC
CACTTCGGGC TGGCGCTGGA TGACTACGCC CACTTCACCT CGCCGATCCG GCGCTACCCG
GATCTGCTGG TGCATCGTGG CATCCGCCAT GTGCTGCGCA AGGGCAGCAA CAAGGCCTTC
CCGTACTCGC ACAACGACAT GGAATCCCTC GGCGAGCACT GCTCCATGGC GGAACGCCGT
GCGGATGACG CCACACGTGA CGCGGTCGCC TGGCTCAAGG CCGAATACAT GCAGGACAAG
GTCGGCGAGA CCTTTGACGG CGTGGTCTCC GGAGTGACCG GATTCGGGCT GTTCGTCGAG
ATCAAGGATG TCTATATCGA GGGCCTGGTG CACGTGACGG CCCTAGACAA CGACTTCTAC
CACTTCGAGC CGAGTCGTCA CACCCTGACC GGCGAGCGCG GTGGGCGGGT ATTCCGCATT
GGCGACGAGG TGCGCGTGCA GGTTGTGCGC GTTAGCCTGG ATGATCGCAA GATCGATCTG
GCACTGGCCG AGGAAGCCAA GGGCGAGGCC GCGCCGAAGA AGAAATCCGG CCGCGGTCGC
AAGCGCAAGG ACGCCGAGTC CGTGCAGCCG GCGCCGGAGG CCGCGCCCGA GCAGGGCCAG
GACGACGCCC CGCCGAAGAA GAAGCGCCGC CGCCGCGGTG GGCGCGGTCG CGGCAAGTCG
GCGGAGTCCG CGGCTGAAGC CCCGGCTACG GAAGCTCCGG CCTCAGCCAC TGACGCCGCA
GAGACGGCGC CCGGCGCCGA TGACGAGCCC GGTGGCAAAT CCGGCCGGCG CCGCCGTGGC
CGTCGGCGCC GTTCGTCCAG CCCCTCTTAG
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| Protein sequence | MPRKRSKAPA DPNFEREAQK YDNPIPSREF ILGLLQEADN PLSYDEIAER LEISDDDRLE
ALRRRLKAME RDGQALCNRR GAYLPVNQED LIRGRVIGHP DGFGFLVPDE QDDDLFLSPR
QMRGVFHGDR VLARVMGVDR RGRREGGIVE VLEHNTTQVV GRLRIEDGVG ILTPDNKRIT
HDILVPPDGL GESGDDQIVV VRIRESASRT ARLRGDVIEV LGEHMAPGME IDIAIRAHGL
PHEWPEEVAA AADELGAEVS EKAKKGRLDL RAQPFVTIDG DDARDFDDAL YCERDGKGWR
LWVAIADVSH YVEREAALDR EARTRGTSVY FPNNVIPMLP EVLSNGLCSL NPNVDRLSMV
CEMEIGARGA LKSYRFHEGL IRSHARLIYE DVAAMLDGDA PLREQNEHVM PHLEVLHEVF
KALHAARNRR GAIDFDTTET KIIFGEDRKI EKIVPTERND AHRMVEECMI MANVAAARFL
KKHKVPALYR IHDQPPTDKV DDLRDFLNGV GLTLGGGSEP SPRDYTEVLK AAKKRPDQQL
IQTVLLRSLS QAVYAPELDG HFGLALDDYA HFTSPIRRYP DLLVHRGIRH VLRKGSNKAF
PYSHNDMESL GEHCSMAERR ADDATRDAVA WLKAEYMQDK VGETFDGVVS GVTGFGLFVE
IKDVYIEGLV HVTALDNDFY HFEPSRHTLT GERGGRVFRI GDEVRVQVVR VSLDDRKIDL
ALAEEAKGEA APKKKSGRGR KRKDAESVQP APEAAPEQGQ DDAPPKKKRR RRGGRGRGKS
AESAAEAPAT EAPASATDAA ETAPGADDEP GGKSGRRRRG RRRRSSSPS
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