Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1879 |
Symbol | |
ID | 8807652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1995382 |
End bp | 1995720 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | succinate dehydrogenase, hydrophobic membrane anchor protein |
Protein accession | YP_003461106 |
Protein GI | 289209040 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.141776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGACTGC TGTCGGGGCA GGGCGCGTGG TTGCTGCAGC GCATCACGGC CGTCTATGTC GGGCTGTTCG TGATCTTGGT GCTGGGCTAT TTCCTGATCG CCCCTCCATC GGATCACGCG GCCTGGGTGG CGGTAATCGC GCACCCGGCT GTGGCGTTGG GCAGTGCGCT GTTTGTCGTG CTGCTGCTGT TGCATGCGTG GATCGGGCTG CGCGATGTCG TGCTCGACTA CGTGAAGCCA CTGGCACTGC GCCTGACCGT GCTGACCCTC GGTGCGGGCG CGCTCATCCT TCTGGGCCTG TGGGCTCTTT TCCTCCTGAT TCGAACGGGG CTTGCATGA
|
Protein sequence | MRLLSGQGAW LLQRITAVYV GLFVILVLGY FLIAPPSDHA AWVAVIAHPA VALGSALFVV LLLLHAWIGL RDVVLDYVKP LALRLTVLTL GAGALILLGL WALFLLIRTG LA
|
| |