Gene TK90_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1748 
Symbol 
ID8807520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1867040 
End bp1867597 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003460975 
Protein GI289208909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.268511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC AACTCCACGA ACCCGCCCCC GGCTTTCACC ACCCGATCGA ACTCCTGCGG 
GCCTGTCATC GGCGGATCAC GAACTGCCTC GACGCGCTGG AGCGACTGTC GGGACACCTG
GAGCAGCACG GGGCCGACGC AGAGGCCCAG TCCGCGGCTC GCCGTGTGCT GGCCTATTTC
GAGCAGGCCG CCCCGCAACA TCACGCCGAC GAGGACCAGG ATCTGTTCCC GATCCTGCAT
GCATACCGCG ACCATCCCGA GGCCCATCCA CAACTGGGTG AGTGGATGGA TCGCCTGAGC
GCGGAGCACC CTCGGCTTGA GGCCGGCTGG GACGCCCTGG AGCCTGCCCT GCAAAACATT
GCGGCGGGGC ACGCGGATCC GCTGGAAGGC GCGACTGACT GGATCCAGTG CTACCGGACC
CACCTCGAGC TGGAGGAACA AGCCGTACTG CCACTGGCTG ACCACCTGCT CAGCGCCGAG
GAGCGCGCCC TCATCGGACG TTCCATGGCG CGCCGGCGCG GCATCCCGGA CGCGTACGCG
AAGCCCGCCG ATGAGTGA
 
Protein sequence
MKLQLHEPAP GFHHPIELLR ACHRRITNCL DALERLSGHL EQHGADAEAQ SAARRVLAYF 
EQAAPQHHAD EDQDLFPILH AYRDHPEAHP QLGEWMDRLS AEHPRLEAGW DALEPALQNI
AAGHADPLEG ATDWIQCYRT HLELEEQAVL PLADHLLSAE ERALIGRSMA RRRGIPDAYA
KPADE