| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1686 |
|---|
| Symbol | |
|---|
| ID | 8807458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1802680 |
|---|
| End bp | 1803834 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2006 |
|---|
| Protein accession | YP_003460917 |
|---|
| Protein GI | 289208851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.190003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGGTGG TTATGGTGTT GATGTTGGTG GGGGTGTTGG CGGCGTGCGG GGGCGCGGAG
CCTCCGGAGA CCGACGATAC GGGGGTCACT GGGCTGCGCG TGGGCGAGGC CCTGGGTGGC
GAGGAGACGG TCGGATTCCG GCGTGCGGAT GCGCCGCGGG TGTTCGAGTT TCCGCGCGAT
CACGGGCCGC ACCCGGGGTT TCGCAACGAA TGGTGGTATG TGACTGGCAA TCTCGACGGG
CCGGAGGGCG AGCGGCTGGG CTTTCACATC ACCTTCTTTC GCGTCGGACT GGCGCCGGAG
TTGGCGGGGG ACGCCCGCTG GCACGACTCG GCCTGGGCCA GTCCGGACAT CTGGATGGCA
CATACGGCCG TGGTGGACCA GGAGGCCGGG TATCACGCCT CCGAGGAGCG CTTCGTGCGC
GACGGGGCCG GGCTGGCCGG GGCAACGCAA CCGGTCGGGC GCGTGTGGGC GGAGGACTGG
CAGCTCGCGG ACCTCGATCA GGAGCGCTGG ACGCTGGCCT TCAGCGTGGA CGACTACCGC
CTGCAGCTGG AGCTGGAGCC GCTGCGCGGC CCGGTTCTTC AGGGCGAGGC GGGGCTCAGC
CAGAAGGGCC CGGAGCCGGG CAATGCCTCC TATTACTACT CCATGCCCCG CATCGCGGTG
CGCGGGGAGG TGGAGCGCGG CGGGCGCGGG CCCCTGGCGG TCACCGGTCA GGCCTGGATG
GACCGCGAGT GGAGCACCAG TGCGCTGTCC GAGGATCAGG TGGGCTGGGA CTGGTTCGCG
CTGCAGTTCG ACGACGGGCT GGACGTCATG TACTACCAGC TGCGCAAGGA AGACGGCGAG
CCGCACCCGC TGTCCAAGGG CCGCTGGATG CCGGCGGATG CCGACGACCG ATTGCTGGAA
CCCGACCAGG TCGAACTTGA GCCCCGGCGC TGGGCCACGC AGCCCTCCGG CAACCGCTAC
CCAGTGGAAT GGGCGATGCG CATCGCGCCG CCGGACGGCT CGGCCCCGCG CAAGTTCACC
GTGCGTGCGA TCCGCGACGA CCAGGAGATG GATACCGTAA TCCGCTACTG GGAAGGCGCG
GTGGACATCC TGGATAGCGA AGGGCAACCC GTTGGGCGCG GCTTCGTGGA GCTGACCGGC
TACGACGACG AGTAG
|
|---|
| Protein sequence | MRVVMVLMLV GVLAACGGAE PPETDDTGVT GLRVGEALGG EETVGFRRAD APRVFEFPRD
HGPHPGFRNE WWYVTGNLDG PEGERLGFHI TFFRVGLAPE LAGDARWHDS AWASPDIWMA
HTAVVDQEAG YHASEERFVR DGAGLAGATQ PVGRVWAEDW QLADLDQERW TLAFSVDDYR
LQLELEPLRG PVLQGEAGLS QKGPEPGNAS YYYSMPRIAV RGEVERGGRG PLAVTGQAWM
DREWSTSALS EDQVGWDWFA LQFDDGLDVM YYQLRKEDGE PHPLSKGRWM PADADDRLLE
PDQVELEPRR WATQPSGNRY PVEWAMRIAP PDGSAPRKFT VRAIRDDQEM DTVIRYWEGA
VDILDSEGQP VGRGFVELTG YDDE
|
|---|
| |