| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1675 |
|---|
| Symbol | |
|---|
| ID | 8807447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1793817 |
|---|
| End bp | 1794764 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF403 |
|---|
| Protein accession | YP_003460906 |
|---|
| Protein GI | 289208840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCGA GAGTCGCGGA ACGCGTGTAC TGGATGGCGC GCTATGTGGA ACGGGCGGAG
AACACCGCGC GTATGGTCAC CGCCTTCCAT CTGCTGGCGC TGGACATGCC GAAATCGGTC
CAGCTCTCCT GGAAGGGTCT GGTCGAGGTA ACCGGGAACG ACGAGCTGTT CGACAATCAC
TACCAGCGCG ATGACGAGCG CAATTGCGTG AAGTTCCTGC TGGCCGACGC CGACAACCCC
AGCTCGGTGC TCAATTCCCT GCGTTCGGCG CGCGAGAACG TGCGCACCAC CCGGGACCTG
GTGCCATCCG AGGCCTGGGA GGTGATGAAC GAGCTCTATC TGTTCGCGCG TGACGAAATC
GACCAGGGCA TTGGCAAGCG TGGACGCTTC GAGTTTCTGT CGAGCATCGT CCAGCGCTGT
CAGACCCTGA CCGGGCTGCT GGCGGGCACG ATGAGCCATG ATGCCGCGTA CGACTTTATC
CGCCTGGGGC GCAATCTGGA GCGCGCGGAC ATGTCGACCC GACAGATCGA TGTCGGGGCG
CTTAAGCTGC TGAAGAAGGA CGGAGAGGAC CCGGAGCCGT ACGAAGGCCT GCTGTGGACC
AGTATTCTGC GTTCGGAGAG CGGCTTTCAG ATGTATCGCC AGCACGTAAA AAGGCGCATC
AATGGCGTGG ATGTGGTGCG CTTCCTGTTG CAGGACAATG CCTTTCCGCG TTCGGTTACG
CACGCCCTGA CGCAGGTGCA GGATGCGCTG GAAAGCCTGC CGAACAACGA AGTCCCGCTG
CGGCTGGTGA TCCAGGCCCG GCGCCACGCG ATGAATGCCA GCGTGGACGA GCTGCTGGCC
GAGGACGGTC TGCACGATTT CGTCGACCGG CTGCAGCAGG ATATCGCGGA CATCCACGGC
GCCAACGCCG AGACCTGGTT CCTGGCCGCC CCCGCACACG CCGCGTAA
|
|---|
| Protein sequence | MLSRVAERVY WMARYVERAE NTARMVTAFH LLALDMPKSV QLSWKGLVEV TGNDELFDNH
YQRDDERNCV KFLLADADNP SSVLNSLRSA RENVRTTRDL VPSEAWEVMN ELYLFARDEI
DQGIGKRGRF EFLSSIVQRC QTLTGLLAGT MSHDAAYDFI RLGRNLERAD MSTRQIDVGA
LKLLKKDGED PEPYEGLLWT SILRSESGFQ MYRQHVKRRI NGVDVVRFLL QDNAFPRSVT
HALTQVQDAL ESLPNNEVPL RLVIQARRHA MNASVDELLA EDGLHDFVDR LQQDIADIHG
ANAETWFLAA PAHAA
|
|---|
| |