| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1623 |
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| Symbol | |
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| ID | 8807395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1735103 |
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| End bp | 1737142 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_003460856 |
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| Protein GI | 289208790 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.127673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.170261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCG AGCGCGCATT GCAGGACACC GGGGCGCTGC TGGATCTGCT CGGGGAGTGG
GAGCATGCGG GCTGGGTGCG CGGCGTCGAC CGCGTGCTGG TGCGTTTTCT GCGCGAGCAG
GTGCCCGCCG CACCGCCGTT GACGCTGTTG CTGGCGGCGC TGACCAGCCA CCAGGCCGGG
CGCGGGCATG TCTGCCTGGA CCTCGACGGT CTGCTGGAGG CCCCGGACCG GATGCTGTCG
CTGCCGCCGG AAGGCGCGGA GCGGGGGCTT CCTAGGCCCT CGGATGTGCT GCGCGGCCTG
GACCGTGCGG CACTCGACAC TGCGCTGGAA GGGCATCGGA TCTGCGGTGT CGACGCGGAC
GCCGGGACGC CGCTGGTGCG GGCGCAGGAT CGGTTGTATC TGCGTCGCTA CCGCGAGGCC
GAGCGCCGGA TCGGGGAGGC GGTGGCCGGA CGCCTGCGCG AGCAGCCGGC CTGGCGCGAA
GGGCTGGATG CGGATGTGCT GCGCACCTGG CTGGATCGGC TGTTCGGTCC GGCCGACGAG
GCCGATGGCG AACCGGACTG GCAGCGCCTG GCCTGCATAC TGGCGGCCGG ATCCGGGTTC
AGCGTGATTA CCGGCGGGCC GGGCACCGGC AAGACCTACA CGGTGCTGCA ACTGCTTGCG
CTGCTGCAGG GGCTGCAGGG GGAGGGCGAG CCGCTGCGTA TCCGCCTGGC GGCGCCGACC
GGCAAGGCCG CCGCCCGGCT GAACGCCTCG GTCGCGGGGG CGGTGGACGC GCTGGGGCTG
GAACGCTTCC CCGGCGGCGT GCGTCTGCGT GCCGCGATCC CGCGCGAGGT GGTCACGCTC
CATCGCCTGC TGGGCGCGCG ACCGGATACC CGACGCTTCC GCCACGATGC GCGCAATCCG
CTGCCGGTGG ACGTGCTGGT GGTGGACGAG GCCTCAATGG TGGATCTGGA GCTGATGGCC
AGCCTGATGG TCGCGGTGCC GGCCCATGCG CGGCTGGTGC TGCTGGGGGA TCGCGACCAG
CTCGCCTCGG TGGAGGCCGG GGCGGTACTG GGCGAGCTGT GCGCACGGGC CGACGGCGGG
CATTACACGC CGCAGACGGC CGCCTGGCTG CGCGAGGTGG CCGGGCTGGA ACTGCCGGCC
GGCTATGTGG ACGAGGACGG GCGCGCGCTG GATCAGCATG TGGCGATGCT GCGCCGCAGC
CGCCGCTTCG GCGCGGACAG CGGGATCGGT CGTCTGGCCG CGGCGGTGAA CGACGGCACG
GCCGAGGTGA CGGGCCACCC GGGCGAGGAT GTCTACGCGG CGGTGCTGCA GGGCCCGGAC
GATCCGGCCC TGCTGCGGCG GGTGCTGGAC GGGGCCGGGC ATGCCGACGC CGCACCGTTC
GGGGTGGTCC GCTATCTGGA GCATTTGACG GCCGGACGCC CGGCATCCCG CGATGCGCGC
GGCACGTGGG AGGAATGGGC GCGCGGCACG CTGCGCGAGC ACGGGCGTTT CCAGTTGCTG
TGCGCCGTGC GCGAGGGGCC CTGGGGCGTG GACCGGATGA ACCGGCGCGT TGCCGGAGCA
CTGACGGCGC GCGGGGTATT GCAGGCAGAG GGTGTCTGGT ACGAGGGCCG CCCGGTGATC
GTCACACGCA ACGATTACGC GCTGGGGCTG ATCAACGGCG ACATCGGCGT GACCCTGCGC
GTGCCCGCCT GGCTGGCCCG GGGCGATGCC GAACCGGGCG CGGACGATGC GACGGAAACG
GCCCTGCGGG TCGCCTTCGT CGCGGCCGAC GGGCATGTGC GGTGGATGAT CCCGCAGCGC
CTGGAGTCCG TGGAGACGGC ATTCGCGCTG ACGGTGCACA AGTCCCAGGG CTCGGAGTTC
GAGCATGTCG CCTTCCTGCT GCCCCCGCCG GAGAGCCCGC TGCTGACGCG CGAGCTGGCC
TACACCGCGA TCACGCGCGC GAGCGGCTGG CTGAGCCTGT TCGAGCCACA GGCGGGGGTT
CTGCAGCAGG CGAGCCGGCA ACCGACCCGG CGCAGTGGCG GCTTGCGCAC GTGGCTGTAG
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| Protein sequence | MTAERALQDT GALLDLLGEW EHAGWVRGVD RVLVRFLREQ VPAAPPLTLL LAALTSHQAG
RGHVCLDLDG LLEAPDRMLS LPPEGAERGL PRPSDVLRGL DRAALDTALE GHRICGVDAD
AGTPLVRAQD RLYLRRYREA ERRIGEAVAG RLREQPAWRE GLDADVLRTW LDRLFGPADE
ADGEPDWQRL ACILAAGSGF SVITGGPGTG KTYTVLQLLA LLQGLQGEGE PLRIRLAAPT
GKAAARLNAS VAGAVDALGL ERFPGGVRLR AAIPREVVTL HRLLGARPDT RRFRHDARNP
LPVDVLVVDE ASMVDLELMA SLMVAVPAHA RLVLLGDRDQ LASVEAGAVL GELCARADGG
HYTPQTAAWL REVAGLELPA GYVDEDGRAL DQHVAMLRRS RRFGADSGIG RLAAAVNDGT
AEVTGHPGED VYAAVLQGPD DPALLRRVLD GAGHADAAPF GVVRYLEHLT AGRPASRDAR
GTWEEWARGT LREHGRFQLL CAVREGPWGV DRMNRRVAGA LTARGVLQAE GVWYEGRPVI
VTRNDYALGL INGDIGVTLR VPAWLARGDA EPGADDATET ALRVAFVAAD GHVRWMIPQR
LESVETAFAL TVHKSQGSEF EHVAFLLPPP ESPLLTRELA YTAITRASGW LSLFEPQAGV
LQQASRQPTR RSGGLRTWL
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