| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1378 |
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| Symbol | |
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| ID | 8807144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1471046 |
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| End bp | 1472305 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003460620 |
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| Protein GI | 289208554 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.361275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT CGCTCCGACC AACGCCCGGT GACGGGCGCG CACTGAAACC CCATCTGGTC
CCCGGCCTGC GCGACTACCT CAACGAGGAC GAACACGCCG AGGGCCGACT CGAGGCCCAT
GCCCTGATCG AAGACGCCGT CGCCGTACGC GCCTCCGACA TCCATCTCGA CCCCGAGCCT
GACGGCTACC GCATTCGGTT GCGCATCGAT GGCCTGATGG TGGACGCCAC AACACTCGAG
ACCGGCCTGG GGGAACTGCT GTCCAATCAG CTCAAGACCC TGGCCAGTCT CGATCCAATG
CCCACCCTGA ACTCCGCGGA AGGCAGCTTC GCCTGGCGCG ACGAAGACAC GGGGCACATG
GATCTGCGTG TGACGGCCGT ACCCTGCGTC AACGGCGACA AGCTGTCCGT GCGCATCCTG
GCAGAGCCCG ATGCCTTCCA GGACATCAGC GACCTGGGGC TGCCGGAACA GGAAGTCGAG
GCCATTCGCC AGTGGACACA GACAGCCGGT GGCGTACTGC TGGTGACCGG CCCCACCGGC
AGCGGAAAGA CCACGACCCT GTACGCCCTT CTGCACGAAA TCGGGCAGAC ACCCCAGCAG
ATCATCACGC TCGAGGACCC AGTCGAGTAC GCCATCCCGG GCGTGAACCA GATCCAGATC
AATACCGACC AGGGGCTCGA CTTCGAACAA GGCACCCAGA CCCTGCTGCG ACTCGATCCG
GATTATGTAC TGGTCGGGGA GGTCCGCGAC GGGCCATCCG CCCGCGGCGC GATCAACATC
GCCACCAGCG GGCGTTCCCT GATGGCCACC CTGCACAGTC GTGATGCAGT CGGTACCGTC
GCCTCCCTGC GCAACATGGG CCTTGAAGAC TTCGAGATCG CGCCGACACT CGAGCTGGTG
ATCGCACAAC GGCTTGTGCG GCGTCTGTGC CCGCATTGCC ATGAGCGCCG GGCGCCGAAC
GACCGAGAAC AACAGTGGCT CGGCATCAGC GGGCGCAAGG CGCCCGAGGC GGTCTGGGCC
GCGCGCGGCT GCTCCGCCTG CAACAATCTG GGCTACCACG GCCGCATCGG TATCTTCGAG
GTCTGGCACC TGGACGAGTC CGACAGCGCG GCCATCCTCG ACCACCACGA CGACAGAGGC
CTGCGCCAGC GCCTGGCCGA CAAGGGCCAG CGCATGCTCC TTGATAACGG GATGGACAAG
GCCGAACGCG GCCTGACGAC CTATGACGAG TTGTTCCGCG CCGGCCTGCT TTCCCCGTAG
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| Protein sequence | MPESLRPTPG DGRALKPHLV PGLRDYLNED EHAEGRLEAH ALIEDAVAVR ASDIHLDPEP
DGYRIRLRID GLMVDATTLE TGLGELLSNQ LKTLASLDPM PTLNSAEGSF AWRDEDTGHM
DLRVTAVPCV NGDKLSVRIL AEPDAFQDIS DLGLPEQEVE AIRQWTQTAG GVLLVTGPTG
SGKTTTLYAL LHEIGQTPQQ IITLEDPVEY AIPGVNQIQI NTDQGLDFEQ GTQTLLRLDP
DYVLVGEVRD GPSARGAINI ATSGRSLMAT LHSRDAVGTV ASLRNMGLED FEIAPTLELV
IAQRLVRRLC PHCHERRAPN DREQQWLGIS GRKAPEAVWA ARGCSACNNL GYHGRIGIFE
VWHLDESDSA AILDHHDDRG LRQRLADKGQ RMLLDNGMDK AERGLTTYDE LFRAGLLSP
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