| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1375 |
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| Symbol | |
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| ID | 8807141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1468317 |
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| End bp | 1469726 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003460617 |
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| Protein GI | 289208551 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.508736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCGAGG CATTCGCCGA CACCCCGGAT ATCGACCCGG ACCTTAGCCG CGAGGTCATC
GAGGGGATCG CCCAGGCACT CGGCCATGTG TACAAGCGGG AACACGATCG CCGCGTGATC
GAGCACATGG CCTACTTCGA CAGCCTGACC GGGCTGGGTA ACCGCGCCCT GTTCTTCGAC
CGCCTTGAGC TCGCCCTGCG CCGCGCACGA CGAGCCGATC AATGCGTAGC GGTTCTGGCA
CTCAACATCG ACCGCTTCCG CGACATCAAC GACATGGTCG GGAAGCAGGC CGGCGATCAG
CTCCTGATCA CACTCGCGCA AGGCCTGCAG GACGTCATCC GCGAGACCGA TACGGCGGCG
CGCATCGGCG GCGACGAGTT TGTAGTGGTA TTCGACGGGA TCGACTCCTC AGAGGATGTC
GAGGGGCTTT GTCAGCGCGT GTTGAAGGCC TTGCATCACC ACCATTCCAT GCACACAGCC
GAAGAATTCC ATCCCCGATT GAGTGCGGGT GTTGCGGTAT TTCCCGGGGA TGCCCCTAAC
GCCGAGGCCC TGACCCGCTG TGCGGAAACC GCCCTGCAGC GTTCCAAGAC AGAGGGTGGA
GCCCGCCTGA CCGTATTCGA CCCCGCACTG GCCGAGCGCA GCGCGCGGCG GCGTGAGCTG
GAACAGGAAG TCCGTGCTGC CGTGAGCAAC GGCGAACTAA CCCCCTGGTT TCAGCCGATC
GTAGCCCTGC CCGGTGGGCG CATTATCGGG GCCGAGGCCC TGCTACGCTG GCAGCGCGCC
GGGGCACCCG GGCCGGATCA GTTCGTACCG ATACTGGAAG AACTCGGCTT GATGCTGGAG
GTCGGCGACC AAGTGTTGCA CACCGCGATG CAGCAGGCCG CCGACTGGCG CGCGGCGGGA
CACGAGTTTC AGCGCATCTC GGTGAACGTC TCGCCGGTAC AGCTCAAGCG CGACCACTTT
CTTACCGTGC TGGACCAAGC CCTGGCCAAC ACGGGCCTGC CCGCCGAGTG CGTCTGCCTG
GAGGTCACCG AAAATGTGTA TCTGGAGGGC GACTCCAGCA TCCGCGACCG GATCGCGGCC
ATCAGCGAGC GCGGGGTACA TATCGCGCTC GACGATTTCG GTACCGGGTA CTCGGCCCTC
GGCTACCTGC AATGGCTACG CCTGGACACC CTCAAGATCG ACAAGAGCTT CGTTCAGCCA
CTCGGCCAGG ACCCCTACTA CAGCAATCTT GTTCGCTCGA TCATTGGTCT GGCCCAGGCG
CTGGATTTGC AAGTGACCGC CGAGGGCATC GAGCACCCGG AAGCGGCGCG CATGCTGGCC
TCGATGGACT GCACCTATGG CCAGGGCTAT TACTTTGGTC GCGCCATGCC GGCGGATGCC
CTCACCCCGC TGCTGCACAA GCGTCTTTAG
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| Protein sequence | MIEAFADTPD IDPDLSREVI EGIAQALGHV YKREHDRRVI EHMAYFDSLT GLGNRALFFD
RLELALRRAR RADQCVAVLA LNIDRFRDIN DMVGKQAGDQ LLITLAQGLQ DVIRETDTAA
RIGGDEFVVV FDGIDSSEDV EGLCQRVLKA LHHHHSMHTA EEFHPRLSAG VAVFPGDAPN
AEALTRCAET ALQRSKTEGG ARLTVFDPAL AERSARRREL EQEVRAAVSN GELTPWFQPI
VALPGGRIIG AEALLRWQRA GAPGPDQFVP ILEELGLMLE VGDQVLHTAM QQAADWRAAG
HEFQRISVNV SPVQLKRDHF LTVLDQALAN TGLPAECVCL EVTENVYLEG DSSIRDRIAA
ISERGVHIAL DDFGTGYSAL GYLQWLRLDT LKIDKSFVQP LGQDPYYSNL VRSIIGLAQA
LDLQVTAEGI EHPEAARMLA SMDCTYGQGY YFGRAMPADA LTPLLHKRL
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