| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1329 |
|---|
| Symbol | |
|---|
| ID | 8807095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1417089 |
|---|
| End bp | 1417667 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Colicin V production protein |
|---|
| Protein accession | YP_003460573 |
|---|
| Protein GI | 289208507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0804105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTGGA TCGACCTGGT CATCATTGCC CTGATCGTTG TCTCGGGGCT CATCAGTCTG
TTTCGTGGCT TCGTGCGCGA GTCGTTCTCG CTCGCGACCT GGATTGTGGG CATCTGGCTG
GGTATTCGAC ATGCCGCCGA GGTCGCCGAA GTCCTGCCGC AGGCGCTGTC GGATGCGACA
CTGCGCCTGG GGGTCGGCTT TGCCCTGATC TTTATCGCGG TGCTGATCGT GGGCGGCATC
CTTGGAGTGC TGGCCAATCG GCTGGTGCGC GGTAGTGGCC TGACGGGTAC GGACCGCTCT
CTGGGCGTGA TCTTTGGCCT GCTGCGCGGC GTGCTCCTGG TGGCGGTGCT GGTGTTTGCC
GCCTCGCTGA CGTTGATGCC GGAGGAGGGC TGGTGGGAGA ACAGCCGCCT GATCCCCGAA
TTCGAACGTC TGGTGGACTG GATGATCGCG CAATTGCCCG ACAGCTGGCA GGAACAGATC
GGCAGTCTGC TGGCCGATGA TCCTGTCGAA CCCCCCGTGG ATGAGCCGGC CGCTGAACCA
CCGGCACCGG AAACCGAACC CCCCGCCGAC CAACGCTAG
|
|---|
| Protein sequence | MNWIDLVIIA LIVVSGLISL FRGFVRESFS LATWIVGIWL GIRHAAEVAE VLPQALSDAT
LRLGVGFALI FIAVLIVGGI LGVLANRLVR GSGLTGTDRS LGVIFGLLRG VLLVAVLVFA
ASLTLMPEEG WWENSRLIPE FERLVDWMIA QLPDSWQEQI GSLLADDPVE PPVDEPAAEP
PAPETEPPAD QR
|
|---|
| |