| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1293 |
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| Symbol | |
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| ID | 8807057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1368755 |
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| End bp | 1369819 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003460537 |
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| Protein GI | 289208471 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.970908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG CATATCCGTG GTCGCCACCG ATTACCGGGC GCATGAAAGA GGCCCCGGAG
GATTTCTGCG TGTTCGAGCT TCCTGCGACC GAGCCCGAAG GCAACGGCGA GCACCTGTGG
CTGGAGATCG AAAAGCGGTT GCTCAACACC GAGGATGTCG CTGTCGCGCT GGCGCGGGCT
TGCGGGGTAC CGCGCGGCCA GGTGAGCTAT GCCGGGCGCA AGGACCGGCA GGCCGTTACG
CGGCAGTGGT TCAGCGTGCA GTGCACGGCC ACTGCCGAAC CGGATTGGCA AACTCCAGCG
ACCTTGATGG AACGCCTGGG CAAGGACGCC GAGGGCGAGG CCCGAGTGCT GCGGGCCGAG
CGGCATTCGC GCAAGCTGCG CACCGGACAC CTCGCGGGGA ACCGTTTTGT CGTCTGGCTG
AGGGGCGTTG CAGGCGATCG CGATATGGCG GAGCAGATCC TTCGGCGTAT CCGGGAGCAG
GGGGTCCCGA ATTACTTCGG TCAGCAACGG TTCGGCCGCC GCAACCTGGA ACAGGCCGAG
CAATGGCTAA GCGGGGGGAG GGCGCCACGG GGTCGTAATC AGCGCAGCCT GCTGCTCTCT
GCGGCGCGCT CCGCAATCTT CAATGTCGCG CTGGCAGAAC GGGTAGCCGA CGATACCTGG
GCACGGTTTC TGCCCGGCGA CGTGGCGACG TTTCAGGGGT CGGGCAGCGT CTTTCCGGTT
CCCGAGGTGA CGGTCGATAT CGAGCAGCGT CTGTCCGAGG GTGTGATCCA CCCGACAGGC
CCCCTATGGG GCCGCGGCGA CCCGCTAACG ACGGGCGAGG TGCGCCGTCG GGAGGCGGAG
TGCGCTCGCC AATTCGAGAC CCTGGCATCG GGCTTGGAGG CTCAGGGTAT GAAACCGGCC
CGCCGGGCGC TGCGGCTACT TCCCGCGTCA CTTGATTGGG AATGGCTGGG GGGTGACCTG
CGTCTGGAGA TCGCCCTCGG CCACGGGGAG TACGCGACCA GCATTCTCGA TGCCGTCATG
GACAGCGTAC CGAACAAGGA TACGGCTTAC GGAAACACTG ACTAG
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| Protein sequence | MTPAYPWSPP ITGRMKEAPE DFCVFELPAT EPEGNGEHLW LEIEKRLLNT EDVAVALARA
CGVPRGQVSY AGRKDRQAVT RQWFSVQCTA TAEPDWQTPA TLMERLGKDA EGEARVLRAE
RHSRKLRTGH LAGNRFVVWL RGVAGDRDMA EQILRRIREQ GVPNYFGQQR FGRRNLEQAE
QWLSGGRAPR GRNQRSLLLS AARSAIFNVA LAERVADDTW ARFLPGDVAT FQGSGSVFPV
PEVTVDIEQR LSEGVIHPTG PLWGRGDPLT TGEVRRREAE CARQFETLAS GLEAQGMKPA
RRALRLLPAS LDWEWLGGDL RLEIALGHGE YATSILDAVM DSVPNKDTAY GNTD
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