Gene TK90_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1278 
Symbol 
ID8807042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1354827 
End bp1355972 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID 
ProductGTP cyclohydrolase II 
Protein accessionYP_003460522 
Protein GI289208456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACG CCGATCGTGG GATTTTCGAC CTTCGCCGGG GCCATCCGGT TTTGCTAAGC 
GGCGAGCAAT CCAGTGTACT GGTAGCCGCC GTTGAAGGTC TGACCCCGGT GTTGCTGGAT
CGCCTGACGC ATATGACCGG CGGTCGCCCA CGTCTGATTC TAACGCCCCA CCGCGCGTCC
GCAATGGGCT GGCCGCAACC GCTGGCCGAG GGCTGGGAAG GCGTCGCGCT GGAATTTGCG
CCCGGAACTG ACCCGGAGGC CCTGTTTACC CTGGCCAGTG CCCCGGAGGC CTCGAACGAG
GGGGAGCACC CGGCCCATGC CCTGGATCAG GCGGAGGTTC GTCCCGCCGA GCCCGCGGAA
GTCGCGGCGC TGGAGCTGGC CCGCGCCGGT CGTCTGCTGC CGGCCGTCGT ATCGGCGCGA
GTGCCCGAAC CGGTACCCGA GGCCATCCAT TCGGCGCTCG CCGACGGGAT GTTTCTGGAT
GTGGGCGAGC GCGAGGCACG GGCGGTTGCG CATCACCCAC GCCTTGAGCT GGCCTACGTG
AGCGAGGCGC CGGTACCCCT CGCGGATGCC CCCGTGACCC GGTTCATGCT GTTCCGGGAG
GGAAACGGGA TCCTGGAACA TGTGGCGGTG GTTATCGGCG AGCCGAACGA GTGGCCGGAT
GCCGTTCCGG TACGGCTGCA TTCGGCCTGC CTGACGGGCG ATCTGTTCGG CAGCCTGCGC
TGTGATTGCG GCGATCAGCT GCGCCTCGGC GTGAAGACGA TCAACGAGAG TGGTGGCGGG
GTGCTGCTGT ATCTGGCCCA GGAGGGGCGG GGTATCGGCC TGGCGAACAA GCTGCGCGCC
TACACGATGC AAACGGCGGG TCTGGACACG ATCGATTCCG ACTGCCAACT GGGCTTCGAG
GCTGATGGAC GCCGTTACGA TGCGGCCGTG GAGATGCTGG AGTTTCTCGG CATCGACACG
GTGCGCGTAC TGACGAACAA CCCCGCGAAG ATCGAGGCGC TGCGCGCTGG GGGCATCCGG
GTGGTGGCCC GCGAGCCCGT CCACGGCACG CTGAATCCGC ACAACCTGCG CTATCTCAGT
ACCAAGGCGG ACCGCGGCGG CCATTGGTTG CAGGAACTGC TGGCCTCGGA GGCGGAGCGG
GGCTGA
 
Protein sequence
MHNADRGIFD LRRGHPVLLS GEQSSVLVAA VEGLTPVLLD RLTHMTGGRP RLILTPHRAS 
AMGWPQPLAE GWEGVALEFA PGTDPEALFT LASAPEASNE GEHPAHALDQ AEVRPAEPAE
VAALELARAG RLLPAVVSAR VPEPVPEAIH SALADGMFLD VGEREARAVA HHPRLELAYV
SEAPVPLADA PVTRFMLFRE GNGILEHVAV VIGEPNEWPD AVPVRLHSAC LTGDLFGSLR
CDCGDQLRLG VKTINESGGG VLLYLAQEGR GIGLANKLRA YTMQTAGLDT IDSDCQLGFE
ADGRRYDAAV EMLEFLGIDT VRVLTNNPAK IEALRAGGIR VVAREPVHGT LNPHNLRYLS
TKADRGGHWL QELLASEAER G