| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1201 |
|---|
| Symbol | |
|---|
| ID | 8806963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1277691 |
|---|
| End bp | 1278257 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2062 |
|---|
| Protein accession | YP_003460446 |
|---|
| Protein GI | 289208380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0952689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC ACATCATCAG AAGGCTGTTC CCCGGCATGG AGGGCGTGCG CGGCCATCGC
GCACTCTCCC CACTGGGGCC GCGCCTGCGG TCTCCGGATC TGTGGCATCT GAACCGCCGC
TCCGTGGCTG GTGCGTTTGC CGTTGGGCTG TTCGTGACCT TCCTGCCTAT CCCTATGCAG
ATGCTGGTCG CCGCGATTGT CGCGCTGATT GTGCGCGTCA ACCTGCCCAT CTCGGTGATC
CTGGTCTGGA TCTCCAACCC GATCACCATG CCTCCCATGT TGTATATGGC CTATACCGTC
GGCCGCAAGC TGCTGGGTGA GCCGCCCCGC GATGTGCATC TCGACTGGAG TTGGGAATGG
TTCAGTACCG AGCTGCTGAC CATCTGGCAG CCGCTACTGC TCGGCAGCCT GCTCTTCGCG
ACGCTGGCCA GCCTCTCCGG ATATCTGCTG GTGCGTGTGC TGTGGCGCGT GAATGTCGTA
CAGCGCCTGC GGACCCGTCG CGCGTTGCGG CGGTTGCGTC AGGAGCGGGA AAGGGAAAAA
GCGGAAAAAG ACGATTCGGG CCGGTAG
|
|---|
| Protein sequence | MAKHIIRRLF PGMEGVRGHR ALSPLGPRLR SPDLWHLNRR SVAGAFAVGL FVTFLPIPMQ
MLVAAIVALI VRVNLPISVI LVWISNPITM PPMLYMAYTV GRKLLGEPPR DVHLDWSWEW
FSTELLTIWQ PLLLGSLLFA TLASLSGYLL VRVLWRVNVV QRLRTRRALR RLRQEREREK
AEKDDSGR
|
|---|
| |