| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1140 |
|---|
| Symbol | |
|---|
| ID | 8806900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1214048 |
|---|
| End bp | 1214506 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460385 |
|---|
| Protein GI | 289208319 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00339595 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000000223341 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA AGCATCTCCC GAGTCTGATG GCCGACTTGT ATCGCGTTGT GAGGGAGCTG
GAAACAATGT TTCCCGGAAG GCATTTCACG CCGGATGGTC ACCTTGTGGG CAGTCTGGGT
GAGTGCCTCG CGGCCTATCA TTACGGGCTT GATCTACTCC GTGCATCCTC ACCCGGCGTG
GACGCCGTGA AGGATGGGCG AGAAATCGAG ATCAAGGCGA CTCAGGGAAC AAGAGTCGGG
CTACGGAGTG GTCCGGAGCA TCTGCTGGTG CTTCGGCTGG ATCGGGGGGG TGGTTTCGCA
GAGATTTATA ACGGCCCGGG CGAGATTGTC TGGCGAGAAT TCGAAGGAAA ACGAAAGCCG
AGCAACGGCC AATATCAAAT TTCGGTAGCT CGCCTGACCC AGTTGATGCA GAACGTTTCT
CCAGAGCTGA GGTTGCCAAT GGTGGTCGCG AACGGGTGA
|
|---|
| Protein sequence | MDKKHLPSLM ADLYRVVREL ETMFPGRHFT PDGHLVGSLG ECLAAYHYGL DLLRASSPGV
DAVKDGREIE IKATQGTRVG LRSGPEHLLV LRLDRGGGFA EIYNGPGEIV WREFEGKRKP
SNGQYQISVA RLTQLMQNVS PELRLPMVVA NG
|
|---|
| |