Gene TK90_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0847 
Symbol 
ID8806602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp903417 
End bp903938 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content70% 
IMG OID 
Product2'-5' RNA ligase 
Protein accessionYP_003460098 
Protein GI289208032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0724174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAACC GGCGCCGCGT GTTCATTGCG CTTTGGCCTG ACGAAGCCAC GCGGGAGATG 
CTGGATGAAG AGGCGAAACG CCTGGGCGGC CCCGGCCGGC CCATACCCAA GGCCCATCTG
CATCTGACCC TGGCCTTTGC CGGCACCATC CCCGCCACCC AGGTCGACTG CATCGCCCGG
GAGATCGGCA TGCTGGAGCA GGAGGCCTTC CCGCTCACGC TGGACCGGCT GGGGCATTTC
GAGCGGGCGC GCGTCAGCTG GATCGGGCCC TCCGAGACAC CGGCCGCGCT CGACACGCTC
GCGGCCCGGG CGCGCGACCT CGCCCGGGCC TGTGGCGTCA CGCCGGAGGA TCACCCGTTC
CTGCCGCACG TCACCCTGCG CCGCTTCGCG CGTCCGCCCG AAAGCGACCG GCCCGAACAC
CCGATCCACT GGAACGCGGC GGAGGTCGCG CTGATCGAAT CCGGCCAGGA TGGCAACCCC
GGCCTCTACC AGGTTCTCGC GCGGGTTCGG TTCAGTTCTT GA
 
Protein sequence
MSNRRRVFIA LWPDEATREM LDEEAKRLGG PGRPIPKAHL HLTLAFAGTI PATQVDCIAR 
EIGMLEQEAF PLTLDRLGHF ERARVSWIGP SETPAALDTL AARARDLARA CGVTPEDHPF
LPHVTLRRFA RPPESDRPEH PIHWNAAEVA LIESGQDGNP GLYQVLARVR FSS