| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0617 |
|---|
| Symbol | |
|---|
| ID | 8806366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 655393 |
|---|
| End bp | 657228 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003459868 |
|---|
| Protein GI | 289207802 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.10554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.226298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGTCT ACCGCAAAAC GCTGCAGTTG CTCACCCCGG CGGAGAAGCG CCGGGGTGCG
CTCGTGCTGG GGATGATGAT GATCATGGCG GTACTGGAGA CCGCCGGGGT CGCATCGATC
ATGCCGTTCC TGTCCGTGCT GGGTAACCCG GAGCTGGTCA ACACCAACCC GGTACTGAAC
CAGCTCTACA CGGGGCTCGG CTTCAACTCG GTGGATCAGT TCATCTTTGC CCTGGGTGCG
GCGGCCTTCG CGCTGATCCT GTTCTCGGCG GTATTTCGCA CGCTCACGCA CTACGCGATG
AACCGCTTCA TCGAGATGCG CCGCCACAGC CTCGGCAAGC GCCTGCTGGA GACCTACCTG
CGCCAGCCGT ATGCGTTCTT CCTGAACCGT CATAGCGGCG ACATGGCGAA GAGCATCCTG
TCCGAGGTCG ACCAGCTGGT GCTGAATGTC TTCCGTCCCG GGATCACGAT GATCGCCTAC
CTGGTCGTAA CCATCGCCAT CGTGGCACTG CTGATCTTTG TCGATCCGTG GCTCGCGCTG
GGGGTCGCGG TCGTAATTGG CGGGGTATAT GGCACGATCT TCGTGTTCGT GCGCGGCCTG
CTCGGGAGCA TCGGCCGTGA TCGCTCGCTC GCCAACAAGG AACGCTTCAC CGCCGCCGGC
GAGGCCCTCG GCGGCATCAA GGACATCAAG CTGCTGGGTC GCGAGCATGC GTACCTGTCG
CGCTTCGATG CCCCCTCCAA GCGCCAGGCC CGGCACCAGG CGACCAACCA GACCATCTCT
CAGGTACCCA AATTTCTGAT CGAGGCGATC GGCTTCGGCG GCATCATCGG GCTCACCCTG
ATCCTGCTGC ATACCCAGGG CGGCACCGGT ACGGATGCGC TGGGCGAGAT CCTGCCGATC
CTCGGGCTGT ACGCCTTTGC CGGCTACCGC CTGCTGCCCG CCGCGCAGCA CATCTACGCG
GGCCTTGCGA AGCTTCGCTT CGGCGCCGCC GCCGTGGAGA GCGTGACCGA GGACCTGCGC
GAACGCGAGG CCCTGGCGGA ACTGCATCGC CAGGCCCCCC AGCCGCTGGT CCCGCAGAAG
ATCATCGCGC TCGAGGGCAT CGAGTTCACC TATCCAGGCG GACACCGTCC CGCGCTGCAG
GCCATCAACC TGGAGATCCC GGTCGGCACA TCGGTCGGGA TCATCGGGAC CACCGGCTCC
GGCAAGACCA CGCTGGTCGA CGTTCTGCTG GGTCTGTTGC GCCCGACCGA GGGCGCCATA
CTGGTGGATG GCCAGCCGGT CACCGATGCC AACCTGCGCG CCTGGCAACA GTCCCTGGGC
TACGTCCCCC AGGACATCTT CCTGACCGAC TCGACCGTGG CCGAAAACAT CGCACTGGGG
ATTCCCGCCG CGCAGATCGA CCACGATCGT GTCGAGCGCT GCGCGCGCAT GGCACAGGTG
CATGACTTCA TCGTTCAGGA CATGCCGGAG CAGTACGCCA CGATGGTGGG CGAGCGTGGT
GTGCGCCTGT CCGGGGGCCA GCGCCAGCGC ATCGGGATCG CCCGCGCCCT CTACCACGAC
CCCGACGTCC TGGTGTTCGA CGAGGCCACC AGTGCCCTGG ACACCGCAAC CGAGCGCGCC
GTGATGGAGG CGATCGAGTC CCTGTCACGC AGCAAGACCA TCATCCTGAT CGCGCACCGC
CTGAGTACCG TGCGCGCCTG CGATCAGGTC GCCCACCTGG AACGGGGATC GTTCGCCTCC
GTTGGCCGCT TCGACGAGCT GGTCACTCAC ACCGAGGCCG ATGCCCCCCA GGTCCAGTCC
GTCCCCGGCC CTGCGGCCTC CGGCACCCAT GGCTGA
|
|---|
| Protein sequence | MGVYRKTLQL LTPAEKRRGA LVLGMMMIMA VLETAGVASI MPFLSVLGNP ELVNTNPVLN
QLYTGLGFNS VDQFIFALGA AAFALILFSA VFRTLTHYAM NRFIEMRRHS LGKRLLETYL
RQPYAFFLNR HSGDMAKSIL SEVDQLVLNV FRPGITMIAY LVVTIAIVAL LIFVDPWLAL
GVAVVIGGVY GTIFVFVRGL LGSIGRDRSL ANKERFTAAG EALGGIKDIK LLGREHAYLS
RFDAPSKRQA RHQATNQTIS QVPKFLIEAI GFGGIIGLTL ILLHTQGGTG TDALGEILPI
LGLYAFAGYR LLPAAQHIYA GLAKLRFGAA AVESVTEDLR EREALAELHR QAPQPLVPQK
IIALEGIEFT YPGGHRPALQ AINLEIPVGT SVGIIGTTGS GKTTLVDVLL GLLRPTEGAI
LVDGQPVTDA NLRAWQQSLG YVPQDIFLTD STVAENIALG IPAAQIDHDR VERCARMAQV
HDFIVQDMPE QYATMVGERG VRLSGGQRQR IGIARALYHD PDVLVFDEAT SALDTATERA
VMEAIESLSR SKTIILIAHR LSTVRACDQV AHLERGSFAS VGRFDELVTH TEADAPQVQS
VPGPAASGTH G
|
|---|
| |