Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0616 |
Symbol | |
ID | 8806365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 654273 |
End bp | 655358 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003459867 |
Protein GI | 289207801 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.460845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.24707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGCACG TTCAATCCCA GCCGCTGCAG ATCAAGAACA GCGGCCGCAT CGCCCGCACC ATTGCGCGCG CGGTCCATCT GCGCCATCTG CAAAAGTCGC GCAAGATTGC CATCCAGTGG CGCGAGAAAC TCATCCGCGC CCACGGCGAA TCCGCGGTCA CGCGCCCGGT CCTGCAGCGG ATCAAGCGCT ATGCGACCGA TACCTACGGG AGCGAGTCCT GGTGGCCATG GCTGGCCGCC TACACCGAGG TGCGGCGCGA GTTCGTCGAG GGGTGGATCG GCGACGATTA CTACACCGAA CACCTGAACC CGCTCTGGAA CCGGCAGGAC ATCCGCCGCC TGAGCGGACT CAAGACCATG GATTCGCGCC TGTTCCCGGA CAGCGTCGTG CCTCCGGTCT TCGTGCGCGT GGGTGGCCAG TACCTGGATG CCCAGGGGAC GCCGGAGCCG CTGGAAACCG CCCTCTCCCG GCTCGAGGCC GGCAAGACCT ATGTGATCAA GCCCGACGAG GGACGCCAGG GCCTCGGCGT GACTTTCACG ACCACCGAGC AGGTGGCCGA AGAGCTCGGC AAGGTCCCCG GAAACTGCAT CGTGCAGCCC CTGATCGAGC AGCATCCGGA TATCGCGCGG ATCAACGCCA GCTCGGTCAA TACGCTGCGG GTTCTGACCT TCCTCGATCC GGAATCCGGG GAACTGCGCA TCCTGAACCA TTTCCTCCGC CTGGGCCGCG AGGGGCAGCG CACCGACAAC GTCTCCACCG GTGGCTACTT CGTCGGTGTC GATGGCGAGG GCTGGCTGGA CGGCCATCTG CGCGACCCGG TCTGCGTCAG CATCGGCTCG GTCCACCCCG ACAGCGGCGT GGACGTAAAG GACTGCCGGA TCCCCAACTT CGGCGCGGTA CGCGAGCTGT GCCTGAACGC CCATCGCCGC ATCCCCTATC TGCGCTTCAT TGGCTGGGAC GTCTGCATTC AGGCCAGCGG CGAGCCCGTC ATCCTCGAGT GGAATGCGGA GCAGGTGGCC TGGTCGCGCA ACGAGTCCTG CTTCGGACCC TTGCTGCCCT CGGTCCCGCG TGGCTATCCG CGCTGA
|
Protein sequence | MTHVQSQPLQ IKNSGRIART IARAVHLRHL QKSRKIAIQW REKLIRAHGE SAVTRPVLQR IKRYATDTYG SESWWPWLAA YTEVRREFVE GWIGDDYYTE HLNPLWNRQD IRRLSGLKTM DSRLFPDSVV PPVFVRVGGQ YLDAQGTPEP LETALSRLEA GKTYVIKPDE GRQGLGVTFT TTEQVAEELG KVPGNCIVQP LIEQHPDIAR INASSVNTLR VLTFLDPESG ELRILNHFLR LGREGQRTDN VSTGGYFVGV DGEGWLDGHL RDPVCVSIGS VHPDSGVDVK DCRIPNFGAV RELCLNAHRR IPYLRFIGWD VCIQASGEPV ILEWNAEQVA WSRNESCFGP LLPSVPRGYP R
|
| |