Gene TK90_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0616 
Symbol 
ID8806365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp654273 
End bp655358 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003459867 
Protein GI289207801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.460845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.24707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACG TTCAATCCCA GCCGCTGCAG ATCAAGAACA GCGGCCGCAT CGCCCGCACC 
ATTGCGCGCG CGGTCCATCT GCGCCATCTG CAAAAGTCGC GCAAGATTGC CATCCAGTGG
CGCGAGAAAC TCATCCGCGC CCACGGCGAA TCCGCGGTCA CGCGCCCGGT CCTGCAGCGG
ATCAAGCGCT ATGCGACCGA TACCTACGGG AGCGAGTCCT GGTGGCCATG GCTGGCCGCC
TACACCGAGG TGCGGCGCGA GTTCGTCGAG GGGTGGATCG GCGACGATTA CTACACCGAA
CACCTGAACC CGCTCTGGAA CCGGCAGGAC ATCCGCCGCC TGAGCGGACT CAAGACCATG
GATTCGCGCC TGTTCCCGGA CAGCGTCGTG CCTCCGGTCT TCGTGCGCGT GGGTGGCCAG
TACCTGGATG CCCAGGGGAC GCCGGAGCCG CTGGAAACCG CCCTCTCCCG GCTCGAGGCC
GGCAAGACCT ATGTGATCAA GCCCGACGAG GGACGCCAGG GCCTCGGCGT GACTTTCACG
ACCACCGAGC AGGTGGCCGA AGAGCTCGGC AAGGTCCCCG GAAACTGCAT CGTGCAGCCC
CTGATCGAGC AGCATCCGGA TATCGCGCGG ATCAACGCCA GCTCGGTCAA TACGCTGCGG
GTTCTGACCT TCCTCGATCC GGAATCCGGG GAACTGCGCA TCCTGAACCA TTTCCTCCGC
CTGGGCCGCG AGGGGCAGCG CACCGACAAC GTCTCCACCG GTGGCTACTT CGTCGGTGTC
GATGGCGAGG GCTGGCTGGA CGGCCATCTG CGCGACCCGG TCTGCGTCAG CATCGGCTCG
GTCCACCCCG ACAGCGGCGT GGACGTAAAG GACTGCCGGA TCCCCAACTT CGGCGCGGTA
CGCGAGCTGT GCCTGAACGC CCATCGCCGC ATCCCCTATC TGCGCTTCAT TGGCTGGGAC
GTCTGCATTC AGGCCAGCGG CGAGCCCGTC ATCCTCGAGT GGAATGCGGA GCAGGTGGCC
TGGTCGCGCA ACGAGTCCTG CTTCGGACCC TTGCTGCCCT CGGTCCCGCG TGGCTATCCG
CGCTGA
 
Protein sequence
MTHVQSQPLQ IKNSGRIART IARAVHLRHL QKSRKIAIQW REKLIRAHGE SAVTRPVLQR 
IKRYATDTYG SESWWPWLAA YTEVRREFVE GWIGDDYYTE HLNPLWNRQD IRRLSGLKTM
DSRLFPDSVV PPVFVRVGGQ YLDAQGTPEP LETALSRLEA GKTYVIKPDE GRQGLGVTFT
TTEQVAEELG KVPGNCIVQP LIEQHPDIAR INASSVNTLR VLTFLDPESG ELRILNHFLR
LGREGQRTDN VSTGGYFVGV DGEGWLDGHL RDPVCVSIGS VHPDSGVDVK DCRIPNFGAV
RELCLNAHRR IPYLRFIGWD VCIQASGEPV ILEWNAEQVA WSRNESCFGP LLPSVPRGYP
R