Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0612 |
Symbol | |
ID | 8806361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 649701 |
End bp | 651047 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003459863 |
Protein GI | 289207797 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.175514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0898587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTATA CCTCGATCCC GTTCACGACC ATGGAGCTAC TGCTGTCGGC CAGCTTCCTG ATGGTGGTGC TGGTCGCCGT ACTGTGGACC GGGGCCAGAC GCGAGGGCTA TCTGTGGCCC CTGCTGGCGG CCCTGCTGGC GCGCATCGGG GCGGCGCTGG TGCAGCGCTT CCTGTTTCCC CTCCCTCAGG GTGGCGCCGA TGCGATCAGC TTCGAGCGCC GGGCCTGGTT CTGGGCCCAG AACGGCTGCG GCAATCTCGG CGACCACTTC AGCATGGGCA GCTCGTACCT GCACAGCTGG CTGATTGCCA ACATCTATGC CTGTTCCGAC CGCGCCCCCC TGGCCTTCCA GGCCGTGAAC ATCGCCCTGG GCATGCTGAC GGTCTATCTG ATTGCGCGCA TCGCCGAGCA GCTCTGGGAC CGCCAGGCCG CCGTGCGTGC GGCCTGGATC GCCGCATTGT TCCCGATCCT GATCGTGAAT GCGGCCGTGC CACTGCGCGA GGTGTGGTTC ACGGCCTTCT TCCTGCTGGG CGTGCTCTGG CTGGTGCGCT GGGTTCAGAG TCAGCGCACC GGTTTCCTGG TGGCCGCCGT CGGAGTGCTG CTGGGTGCGG CGGTCGTGCA TGGCGCGGCG GTGTTTGCGA TCGCGGGCAT CGCGGTCGTA CTGGTCGGCT GGTCGATCAA GGAATTCCTG CGGGCCTCGG ATCTGGGGCA TTTGCGCCCG GGCCTGCTGC TGGGCGGCAT GCTGCTAGGC ACGGCCGGGG TCCTTGGATT CGTGGTGATG GACGAGATGC GCTTCTCGTC GATCGGGCAG TTGGGCGATG TGATGGAACA GACCGAGACG CTGGACCAGC GGGCCGAGCG CAGCGCCCGC GGCGGGGCCG CCTACCCGTC CTTCCTGATC CCGTCCAATG ACCTCCAGGC ACTAGCCCTG ACCCCGGTCC GGGTGGGCTA TTTGCTGTTC GGTCCCCCGC TGTGGGAGGT GCGCTCGCCT GTCCACCTGA TCGGCATGGC AGAGGGTCTG TTCTATCTGA CACTGGTCCT GCTGCTGGCG GTGTATCGCC GCCACTGGTG GCATCGCTCG GACTTCCGGC TGCTGGTCGT AGTGTTCATC GTCCTGGCGA TCATCTTCGC CTGGGGCACC AGCAACTTCG GGACCGCCGC CCGCCATCGC GCCAAGTTCC TCGGGATCCT GATCGCCCTG GCGGCGGGCC TGGCCGGGCG CCGCCTGTGG CGCTGGGAAC GACTGCGACG CCTCGGCGCC ACTCGCTCGA CAGCCCCGAA CAGCACGACG GACCTACCGG AGACTTCCGG CGCGGAACTG CCGCAACCGC GGCGTGCCGC GCCCTGA
|
Protein sequence | MSYTSIPFTT MELLLSASFL MVVLVAVLWT GARREGYLWP LLAALLARIG AALVQRFLFP LPQGGADAIS FERRAWFWAQ NGCGNLGDHF SMGSSYLHSW LIANIYACSD RAPLAFQAVN IALGMLTVYL IARIAEQLWD RQAAVRAAWI AALFPILIVN AAVPLREVWF TAFFLLGVLW LVRWVQSQRT GFLVAAVGVL LGAAVVHGAA VFAIAGIAVV LVGWSIKEFL RASDLGHLRP GLLLGGMLLG TAGVLGFVVM DEMRFSSIGQ LGDVMEQTET LDQRAERSAR GGAAYPSFLI PSNDLQALAL TPVRVGYLLF GPPLWEVRSP VHLIGMAEGL FYLTLVLLLA VYRRHWWHRS DFRLLVVVFI VLAIIFAWGT SNFGTAARHR AKFLGILIAL AAGLAGRRLW RWERLRRLGA TRSTAPNSTT DLPETSGAEL PQPRRAAP
|
| |