Gene TK90_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0612 
Symbol 
ID8806361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp649701 
End bp651047 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003459863 
Protein GI289207797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.175514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0898587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATA CCTCGATCCC GTTCACGACC ATGGAGCTAC TGCTGTCGGC CAGCTTCCTG 
ATGGTGGTGC TGGTCGCCGT ACTGTGGACC GGGGCCAGAC GCGAGGGCTA TCTGTGGCCC
CTGCTGGCGG CCCTGCTGGC GCGCATCGGG GCGGCGCTGG TGCAGCGCTT CCTGTTTCCC
CTCCCTCAGG GTGGCGCCGA TGCGATCAGC TTCGAGCGCC GGGCCTGGTT CTGGGCCCAG
AACGGCTGCG GCAATCTCGG CGACCACTTC AGCATGGGCA GCTCGTACCT GCACAGCTGG
CTGATTGCCA ACATCTATGC CTGTTCCGAC CGCGCCCCCC TGGCCTTCCA GGCCGTGAAC
ATCGCCCTGG GCATGCTGAC GGTCTATCTG ATTGCGCGCA TCGCCGAGCA GCTCTGGGAC
CGCCAGGCCG CCGTGCGTGC GGCCTGGATC GCCGCATTGT TCCCGATCCT GATCGTGAAT
GCGGCCGTGC CACTGCGCGA GGTGTGGTTC ACGGCCTTCT TCCTGCTGGG CGTGCTCTGG
CTGGTGCGCT GGGTTCAGAG TCAGCGCACC GGTTTCCTGG TGGCCGCCGT CGGAGTGCTG
CTGGGTGCGG CGGTCGTGCA TGGCGCGGCG GTGTTTGCGA TCGCGGGCAT CGCGGTCGTA
CTGGTCGGCT GGTCGATCAA GGAATTCCTG CGGGCCTCGG ATCTGGGGCA TTTGCGCCCG
GGCCTGCTGC TGGGCGGCAT GCTGCTAGGC ACGGCCGGGG TCCTTGGATT CGTGGTGATG
GACGAGATGC GCTTCTCGTC GATCGGGCAG TTGGGCGATG TGATGGAACA GACCGAGACG
CTGGACCAGC GGGCCGAGCG CAGCGCCCGC GGCGGGGCCG CCTACCCGTC CTTCCTGATC
CCGTCCAATG ACCTCCAGGC ACTAGCCCTG ACCCCGGTCC GGGTGGGCTA TTTGCTGTTC
GGTCCCCCGC TGTGGGAGGT GCGCTCGCCT GTCCACCTGA TCGGCATGGC AGAGGGTCTG
TTCTATCTGA CACTGGTCCT GCTGCTGGCG GTGTATCGCC GCCACTGGTG GCATCGCTCG
GACTTCCGGC TGCTGGTCGT AGTGTTCATC GTCCTGGCGA TCATCTTCGC CTGGGGCACC
AGCAACTTCG GGACCGCCGC CCGCCATCGC GCCAAGTTCC TCGGGATCCT GATCGCCCTG
GCGGCGGGCC TGGCCGGGCG CCGCCTGTGG CGCTGGGAAC GACTGCGACG CCTCGGCGCC
ACTCGCTCGA CAGCCCCGAA CAGCACGACG GACCTACCGG AGACTTCCGG CGCGGAACTG
CCGCAACCGC GGCGTGCCGC GCCCTGA
 
Protein sequence
MSYTSIPFTT MELLLSASFL MVVLVAVLWT GARREGYLWP LLAALLARIG AALVQRFLFP 
LPQGGADAIS FERRAWFWAQ NGCGNLGDHF SMGSSYLHSW LIANIYACSD RAPLAFQAVN
IALGMLTVYL IARIAEQLWD RQAAVRAAWI AALFPILIVN AAVPLREVWF TAFFLLGVLW
LVRWVQSQRT GFLVAAVGVL LGAAVVHGAA VFAIAGIAVV LVGWSIKEFL RASDLGHLRP
GLLLGGMLLG TAGVLGFVVM DEMRFSSIGQ LGDVMEQTET LDQRAERSAR GGAAYPSFLI
PSNDLQALAL TPVRVGYLLF GPPLWEVRSP VHLIGMAEGL FYLTLVLLLA VYRRHWWHRS
DFRLLVVVFI VLAIIFAWGT SNFGTAARHR AKFLGILIAL AAGLAGRRLW RWERLRRLGA
TRSTAPNSTT DLPETSGAEL PQPRRAAP