| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0607 |
|---|
| Symbol | |
|---|
| ID | 8806356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 644485 |
|---|
| End bp | 645453 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
|---|
| Protein accession | YP_003459858 |
|---|
| Protein GI | 289207792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.365933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.153715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA GCCACACACT GTTCCTGCAG AAACCGGAGG TTCTGGAGAA CCAGCAGGAT
ACGATCGAGG CCCATCTGCA GCAGGCATTA CCCGGCACCA CGCTGACCTT CGCCGGCCAG
CCCGAGGCCA TACCCGACGG GCTTGAGGTC GATGCGGTGA TCGCCCCCAC CCTGCCCTGG
CTGCCCGACG CCCTGGACCG CCTGTCGCGC TATGACTGGG TGCACTTTCT GTCCGCCGGG
GTCGAGAAGA TTTGGGACAT GCCATTCCCC AAGGATGGTC TGCTGATGAC CAAGAGCAGT
GGCGTCCACG GCGCCCCGAT GAGCGAGTAT GCGATCGGGG CCATGCTCTA TTTCGCCAAG
CACTTCGACC GCTTCAACGC ACAAAGCCGC GAGAAGCGTT GGGAGCGCTG CTGGCTCGGG
GAGCTGACCG GGCGCACCGC CATGGTACTC GGCATGGGGC ATATCGGTAC CCAGGTGGCG
CGCCGGGCCC GGGCGTTCGA CATGCGCGTG ATCGGTGTCC AGCGCAACCC GCGCCCCCAT
GACTGCGCCG ACGAGGTCAT TGCCCTGGAT AGCGTGGAGG ACCGCCTGCC GGAGGTGGAC
GACCTGATCG TATGCCTGCC GCTCACCCGG GACACCCGGC ACCGGATCGG CGAAGCCCAG
TTCCAGCGGC TGCAGCCGGG CGCCGTGCTG GTGGACATCT CGCGCGGCGG GGTTGTGGAT
CAGCAGGCGC TGACCCGGGC GCTGGATGCC GGACGCCTGC GCGGCGCGGC GGTGGATGTC
TTCGAGCAAC AACCCCTTCC CGCCCAGTCA CCGCTGTGGA ACCGGGAGAA CGTCCTCGTC
ACACCTCATG TCTCGGGCAC CTCGCCGCAC TATATGGAAC GCGCGCTCGA GATTTTTACC
CGCAATGCCC GCGCGATGGC GCAGGGCGAG CCCGCGGTGA CCCCGGTCGA CCCGATCGCC
GGTTACTAG
|
|---|
| Protein sequence | MRLSHTLFLQ KPEVLENQQD TIEAHLQQAL PGTTLTFAGQ PEAIPDGLEV DAVIAPTLPW
LPDALDRLSR YDWVHFLSAG VEKIWDMPFP KDGLLMTKSS GVHGAPMSEY AIGAMLYFAK
HFDRFNAQSR EKRWERCWLG ELTGRTAMVL GMGHIGTQVA RRARAFDMRV IGVQRNPRPH
DCADEVIALD SVEDRLPEVD DLIVCLPLTR DTRHRIGEAQ FQRLQPGAVL VDISRGGVVD
QQALTRALDA GRLRGAAVDV FEQQPLPAQS PLWNRENVLV TPHVSGTSPH YMERALEIFT
RNARAMAQGE PAVTPVDPIA GY
|
|---|
| |