| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0582 |
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| Symbol | |
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| ID | 8806327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 615439 |
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| End bp | 616665 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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| Protein accession | YP_003459833 |
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| Protein GI | 289207767 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0162662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA CCCCCGCCCG CCGCAAGACC GTCCCCGTTC GCATCGGCCC TGTCACCGTC
GGTGGCGATC ACCCGGTGAT GGTGCAGTCG ATGACCAACA CCGACACCGC CGATGCCCTG
CGCACCGCCG TGCAGGTGGC GGAGCTGGCG CGCGCCGGCT CCGAGGTCGT GCGCATCACG
GTGAACTCCG AGGACGCGGC AAAGGCGGTG CCGGAGATCC GCGAACGGCT GGAGGCCATG
GGACTGGAGG TGCCGCTGGT CGGGGACTTC CACTTCAACG GCCACAAGCT GCTGACCAAA
TACCCGGAGT GCGCCGAGGC ACTGGCCAAG CTGCGCATCA ATCCCGGGAA TGTTGGCCGC
GGCTCGAAGC GCGACGCCCA GTACGCCGCA ATGATCGAGA CCGCGATCCG CTACGACAAG
CCGGTGCGCA TCGGCGTGAA CTGGGGCAGC CTGGATCAGG CCCTGCTCGC GCGCATGATG
GACGACAACA GCCAGCGCGC CGAGCCGGCC GCGCCCGAGG TGGTCATGCA GGAGGCGCTG
ATCGCCTCGG CACTGGAGAG CGCGGCCGAG GCCGAACGCA TTGGTCTGGC CCACGACCGC
ATCATCCTCT CGGCCAAGGT CAGTGGTGTG CAGCCGCTGA TCAGCGTCTA CCAGGACCTG
GCCGCGCGCT GCGACTACCC GCTGCACCTC GGCCTGACCG AGGCCGGCAT GGGCGCGAAG
GGCATCGTCG CCTCCACCGC CGCCCTGGCC GTGCTGCTGC AGCAGGGCAT CGGCGACACC
ATCCGCATCT CGCTGACCCC GGAACCCGGT GGCGACCGTA CGAAGGAGGT CCTGGTTGCC
CAGGAGATCC TGCAGAGCAT GGGGCTGCGC AGCTTCCTGC CGTCGGTGGT CGCCTGCCCC
GGCTGCGGAC GCACCTCCAG CGAGTACTTC CAGCACCTGG CGCAGGACAT CCAGTCCTAC
ATCCGCCAGC AGATGCCCAG CTGGAAGCAG CAGTACCCGG GCGTGGAGGA GATGACCGTC
GCCGTGATGG GCTGCGTGGT CAACGGCCCC GGCGAGAGCA AGCACGCCAA CATCGGCATT
TCCCTGCCCG GCACCGGCGA ACAGCCGGTG GCCCCGGTCT ACGAGGACGG CGAGAAGACC
GTGACGCTCA AGGGCGAGCG CATCGCCGAA GAATTCCAGG CCCGCGTCGA GGCCTACATC
GAACGCCGCT ACGGACAGAC CGCCTGA
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| Protein sequence | MNTTPARRKT VPVRIGPVTV GGDHPVMVQS MTNTDTADAL RTAVQVAELA RAGSEVVRIT
VNSEDAAKAV PEIRERLEAM GLEVPLVGDF HFNGHKLLTK YPECAEALAK LRINPGNVGR
GSKRDAQYAA MIETAIRYDK PVRIGVNWGS LDQALLARMM DDNSQRAEPA APEVVMQEAL
IASALESAAE AERIGLAHDR IILSAKVSGV QPLISVYQDL AARCDYPLHL GLTEAGMGAK
GIVASTAALA VLLQQGIGDT IRISLTPEPG GDRTKEVLVA QEILQSMGLR SFLPSVVACP
GCGRTSSEYF QHLAQDIQSY IRQQMPSWKQ QYPGVEEMTV AVMGCVVNGP GESKHANIGI
SLPGTGEQPV APVYEDGEKT VTLKGERIAE EFQARVEAYI ERRYGQTA
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