Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0525 |
Symbol | |
ID | 8806265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 550666 |
End bp | 551328 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Caffeoyl-CoA O-methyltransferase |
Protein accession | YP_003459776 |
Protein GI | 289207710 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAACC GCTCGATCGG ACTCGATGAC CATCTTCAGG CCTATGTACT GGATCGCTCG CTGCGCGAGT CCAGCCTGCT TGCGGAGTTG CGCGCCGAGA CCGCGGGGCT GCCGGAGCAC AACATGCAGA TCGCTCCCGA ACAGGGGCAG TTCATGGCGC TGCTGGCGCG CCTGGTCGGG GCCCGGCGCT ACCTGGAAGT GGGCACCTTT ACCGGCTACA GCGCGCTGGC CGTGGGGCAG GCCCTCCCCG ACGACGGCGA GGTGGTCTGC CTGGACCACA GCGAGGCCTG GACCGCGATC GCCAGACGCT ACTGGGACCG GGCCGGTCTG GCTGCGCGCA TGGACCTGCG TCTGGGTGAT GCACGCGCCA GCCTGCGCCA ACTGGAGGAC GAAGGACAGA GCGGCCGTTT CGATCTTGCG TTCATCGACG CCGACAAGAC CGGTTACCCG GAATACTTCG AGACCTGCCT GCGACTGGTA CGCCCGGGCG GACTGATCAT GGTGGACAAC ACGCTCTGGC ATGGCCGGGT GGCGGACCGG CACTGCGACG ACGAGGACAC CCGGGCCATC CGCGACTTCA ACCAGGCGCT GCATCGCGAC GAGCGCATCG ACCTCTCGCT GGTACCCATC GGCGACGGCC TGTCCCTGGC CCGGCGCCGC TGA
|
Protein sequence | MSNRSIGLDD HLQAYVLDRS LRESSLLAEL RAETAGLPEH NMQIAPEQGQ FMALLARLVG ARRYLEVGTF TGYSALAVGQ ALPDDGEVVC LDHSEAWTAI ARRYWDRAGL AARMDLRLGD ARASLRQLED EGQSGRFDLA FIDADKTGYP EYFETCLRLV RPGGLIMVDN TLWHGRVADR HCDDEDTRAI RDFNQALHRD ERIDLSLVPI GDGLSLARRR
|
| |